RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 TEX13CA0A0J9YWL9 993 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 APOC3P02656 99 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 OSMP13725 252 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 PRDX3P30048 256 aaKnown RBP13.39□□□□□ -0.27
SMC5-201ENST00000361138 ARHGDIBP52566 201 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 GPR68Q15743 365 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 DEFB115Q30KQ5 88 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 BTN2A1Q7KYR7 527 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 SERPINA11Q86U17 422 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 KLBQ86Z14 1044 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 FBXO22Q8NEZ5 403 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 OR56A1Q8NGH5 318 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 HEBP1Q9NRV9 189 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 NOP16Q9Y3C1 178 aaKnown RBP13.39□□□□□ -0.27
SMC5-201ENST00000361138 IGKV6-21A0A0C4DH24 114 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 A0A1W2PQ09 198 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 LDOC1O95751 146 aaPredicted RBP13.39□□□□□ -0.27
SMC5-201ENST00000361138 HSD3B1P14060 373 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 CFL1P23528 166 aaKnown RBP13.39□□□□□ -0.27
SMC5-201ENST00000361138 HSD3B2P26439 372 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 UGT2B10P36537 528 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 GNALP38405 381 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 MAP3K8P41279 467 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 OR12D2P58182 307 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 SOX4Q06945 474 aaPredicted RBP13.39□□□□□ -0.27
SMC5-201ENST00000361138 SNTA1Q13424 505 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 FAM110CQ1W6H9 321 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 DUS1LQ6P1R4 473 aaKnown RBP13.39□□□□□ -0.27
SMC5-201ENST00000361138 GGHQ92820 318 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 SLAMF8Q9P0V8 285 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 MRTO4Q9UKD2 239 aaKnown RBP13.39□□□□□ -0.27
SMC5-201ENST00000361138 PCDHGB2Q9Y5G2 931 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 COLEC10Q9Y6Z7 277 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 PPP6CO00743 305 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 MSL3P1P0C860 447 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 TNFRSF1BP20333 461 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 ITPKBP27987 946 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 SSTR4P31391 388 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 BMP8BP34820 402 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 POU4F3Q15319 338 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 POMZP3Q6PJE2 187 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 TPRG1Q6ZUI0 275 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 BMP8AQ7Z5Y6 402 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 TMED4Q7Z7H5 227 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 SYNPOQ8N3V7 929 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 YIPF7Q8N8F6 280 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 USP22Q9UPT9 525 aa13.39□□□□□ -0.27
SMC5-201ENST00000361138 LRRC72A6NJI9 287 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 GMFGO60234 142 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 TRIM3O75382 744 aaPredicted RBP13.38□□□□□ -0.27
SMC5-201ENST00000361138 SULT1C4O75897 302 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 RPP14O95059 124 aaKnown RBP13.38□□□□□ -0.27
SMC5-201ENST00000361138 CD2P06729 351 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 SLC35G6P0C7Q6 338 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 VIPR1P32241 457 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 EIF2DP41214 584 aaKnown RBP13.38□□□□□ -0.27
SMC5-201ENST00000361138 FGFBP1Q14512 234 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 RGNQ15493 299 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 CPZQ66K79 652 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 LYSMD2Q8IV50 215 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 FTMTQ8N4E7 242 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 OR52E4Q8NGH9 312 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 OR5J2Q8NH18 312 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 ADAD1Q96M93 576 aaKnown RBP13.38□□□□□ -0.27
SMC5-201ENST00000361138 MTIF3Q9H2K0 278 aaKnown RBP13.38□□□□□ -0.27
SMC5-201ENST00000361138 NMNAT1Q9HAN9 279 aaPredicted RBP13.38□□□□□ -0.27
SMC5-201ENST00000361138 EDARQ9UNE0 448 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 COL2A1P02458 1487 aaPredicted RBP13.38□□□□□ -0.27
SMC5-201ENST00000361138 GABARAPO95166 117 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 ADH1CP00326 375 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 MRPL3P09001 348 aaKnown RBP13.38□□□□□ -0.27
SMC5-201ENST00000361138 IDSP22304 550 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 TRNP1Q6NT89 227 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 PDZD9Q8IXQ8 264 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 ZNF366Q8N895 744 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 OR5P2Q8WZ92 322 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 RPL3LQ92901 407 aaKnown RBP13.38□□□□□ -0.27
SMC5-201ENST00000361138 TRIM43Q96BQ3 446 aaPredicted RBP13.38□□□□□ -0.27
SMC5-201ENST00000361138 P2RY13Q9BPV8 354 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 ZNF471Q9BX82 626 aaPredicted RBP13.38□□□□□ -0.27
SMC5-201ENST00000361138 B3GNT4Q9C0J1 378 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 NUBP2Q9Y5Y2 271 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 PKD1L3Q7Z443 1732 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 DISC1C4P0D8 188 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 CACNB4O00305 520 aaPredicted RBP13.38□□□□□ -0.27
SMC5-201ENST00000361138 B3GALT2O43825 422 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 RENP00797 406 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 GIMD1P0DJR0 217 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 SELENOWP63302 87 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 OXA1LQ15070 435 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 KLHL26Q53HC5 615 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 KDELC1Q6UW63 502 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 TMCO2Q7Z6W1 182 aaPredicted RBP13.38□□□□□ -0.27
SMC5-201ENST00000361138 ZCCHC10Q8TBK6 192 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 ISL2Q96A47 359 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 TSNAXQ99598 290 aaKnown RBP13.38□□□□□ -0.27
SMC5-201ENST00000361138 ZNF350Q9GZX5 532 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 CDH7Q9ULB5 785 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 TMEM221A6NGB7 291 aa13.38□□□□□ -0.27
SMC5-201ENST00000361138 ELOA3DA6NLF2 546 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms