RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 IKZF3Q9UKT9 509 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 SNX8Q9Y5X2 465 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 LEUTXA8MZ59 168 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 CXCR6O00574 342 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 ANKRD28O15084 1053 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 DDAH2O95865 285 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 IGHV4-34P06331 123 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 S100A6P06703 90 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 EFNA1P20827 205 aaPredicted RBP7.38□□□□□ -1.23
CCL28-201ENST00000361115 CCKBRP32239 447 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 SLC19A1P41440 591 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 ARSDP51689 593 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 ERVK-8P63133 956 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 INSM1Q01101 510 aaPredicted RBP7.38□□□□□ -1.23
CCL28-201ENST00000361115 HSPA14Q0VDF9 509 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 LCP2Q13094 533 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 PRKG2Q13237 762 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 PWP1Q13610 501 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 TAB1Q15750 504 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 BAK1Q16611 211 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 ANKRD39Q53RE8 183 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 C6orf136Q5SQH8 315 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 ZNF549Q6P9A3 640 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 CHST9Q7L1S5 443 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 CILP2Q8IUL8 1156 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 CYP4Z2PQ8N1L4 340 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 FNDC5Q8NAU1 212 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 PPP1R16AQ96I34 528 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 TSGA13Q96PP4 275 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 ATOH8Q96SQ7 321 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 GON7Q9BXV9 100 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 GLOD4Q9HC38 313 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 AMBNQ9NP70 447 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 EDARQ9UNE0 448 aa7.38□□□□□ -1.23
CCL28-201ENST00000361115 AAR2Q9Y312 384 aaKnown RBP7.38□□□□□ -1.23
CCL28-201ENST00000361115 RIF1Q5UIP0 2472 aaKnown RBP7.37□□□□□ -1.23
CCL28-201ENST00000361115 OR6C70A6NIJ9 312 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 DFFAO00273 331 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 CLDN5O00501 218 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 PSMD3O43242 534 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 S1PR4O95977 384 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 NPPAP01160 153 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 EPHX1P07099 455 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 CAPN1P07384 714 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 AZGP1P25311 298 aaKnown RBP7.37□□□□□ -1.23
CCL28-201ENST00000361115 TNFSF8P32971 234 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 HNF4AP41235 474 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 PIK3CBP42338 1070 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 AGTR2P50052 363 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 AP2S1P53680 142 aaPredicted RBP7.37□□□□□ -1.23
CCL28-201ENST00000361115 HNRNPKP61978 463 aaKnown RBP eCLIP7.37□□□□□ -1.23
CCL28-201ENST00000361115 MC1RQ01726 317 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 KEAP1Q14145 624 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 OXLD1Q5BKU9 147 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 CPZQ66K79 652 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 HIPK1Q86Z02 1210 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 TRIM48Q8IWZ4 208 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 PHACTR4Q8IZ21 702 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 C10orf111Q8N326 155 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 CARNMT1Q8N4J0 409 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 TTC29Q8NA56 475 aaPredicted RBP7.37□□□□□ -1.23
CCL28-201ENST00000361115 PEX13Q92968 403 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 ESAMQ96AP7 390 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 MRGPRX2Q96LB1 330 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 ZNF599Q96NL3 588 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 SERPINB11Q96P15 392 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 HBEGFQ99075 208 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 SMOQ99835 787 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 THUMPD3Q9BV44 507 aaKnown RBP7.37□□□□□ -1.23
CCL28-201ENST00000361115 SCPEP1Q9HB40 452 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 CCNB1IP1Q9NPC3 277 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 POLHQ9Y253 713 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 KLHL20Q9Y2M5 609 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 PTPRZ1P23471 2315 aaPredicted RBP7.37□□□□□ -1.23
CCL28-201ENST00000361115 CEP250Q9BV73 2442 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 TMEM131Q92545 1883 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 SUPT3HB4E1H0 165 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 TRIM77I1YAP6 450 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 SEC22BO75396 215 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 UGT2B17O75795 530 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 DIRAS1O95057 198 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 SERPINA1P01009 418 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 RPLP0P05388 317 aaKnown RBP7.37□□□□□ -1.23
CCL28-201ENST00000361115 GSTM1P09488 218 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 G6PDP11413 515 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 CYP2A6P11509 494 aaPredicted RBP7.37□□□□□ -1.23
CCL28-201ENST00000361115 CTRB1P17538 263 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 GNALP38405 381 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 YPEL5P62699 121 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 NRG1Q02297 640 aaPredicted RBP7.37□□□□□ -1.23
CCL28-201ENST00000361115 TRA2AQ13595 282 aaKnown RBP eCLIP7.37□□□□□ -1.23
CCL28-201ENST00000361115 CST6Q15828 149 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 GTDC1Q4AE62 458 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 TOR2AQ5JU69 321 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 CTRB2Q6GPI1 263 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 SHQ1Q6PI26 577 aaKnown RBP7.37□□□□□ -1.23
CCL28-201ENST00000361115 DPY19L3Q6ZPD9 716 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 Q6ZSR9 355 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 MSRB3Q8IXL7 192 aa7.37□□□□□ -1.23
CCL28-201ENST00000361115 PLPP7Q8NBV4 271 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms