RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 RCBTB1Q8NDN9 531 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 OR5T1Q8NG75 326 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 DCUN1D4Q92564 292 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 ZNF436Q9C0F3 470 aaPredicted RBP8.96□□□□□ -0.98
VPS13A-203ENST00000360280 TGFB1P01137 390 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 ATP6AP1Q15904 470 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 HAS1Q92839 578 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 PKP2Q99959 881 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 WDR77Q9BQA1 342 aaPredicted RBP8.96□□□□□ -0.98
VPS13A-203ENST00000360280 EBF4Q9BQW3 602 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 A0A0U1RQK1 487 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 A0A1W2PPW3 197 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 SMIM30A4D0T7 59 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 FAM189A1O60320 539 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 PRAMEF2O60811 474 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 SERPINA7P05543 415 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 EVI2BP34910 448 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 ZNF763Q0D2J5 394 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 ARL6IP1Q15041 203 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 PTERQ96BW5 349 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 PRSS51A0A1B0GVH4 220 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 SLC22A31A6NKX4 558 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 HNRNPKP61978 463 aaKnown RBP eCLIP8.95□□□□□ -0.98
VPS13A-203ENST00000360280 LRRC32Q14392 662 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 MELKQ14680 651 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 PCDH17O14917 1159 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 CEACAM19Q7Z692 300 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 IFNL1Q8IU54 200 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 NIPA2Q8N8Q9 360 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 HAVCR2Q8TDQ0 301 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 C2orf15Q8WU43 125 aaKnown RBP8.95□□□□□ -0.98
VPS13A-203ENST00000360280 WDR26Q9H7D7 661 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 TRBV2A0A0J9YWF9 115 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 TCRBV5S4A2TA0A5A2 114 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 FAAHO00519 579 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 TLE1Q04724 770 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 ITPRIPL2Q3MIP1 535 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 PNCKQ6P2M8 343 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 RIMS1Q86UR5 1692 aaKnown RBP8.95□□□□□ -0.98
VPS13A-203ENST00000360280 GPC2Q8N158 579 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 OR6Q1Q8NGQ2 317 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 SLC25A44Q96H78 314 aaPredicted RBP8.95□□□□□ -0.98
VPS13A-203ENST00000360280 IL36AQ9UHA7 158 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 KLHL33A6NCF5 533 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 FTCDNL1E5RQL4 147 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 IRAK2O43187 625 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 RNF130Q86XS8 419 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 C1orf52Q8N6N3 182 aaKnown RBP8.95□□□□□ -0.98
VPS13A-203ENST00000360280 PPP1R14DQ9NXH3 145 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 GLTPQ9NZD2 209 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 H3BSH0 61 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 TRAPPC6AO75865 159 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 CHRNA4P43681 627 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 VSIG10LQ86VR7 867 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 ZDHHC3Q9NYG2 299 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 ZFR2Q9UPR6 939 aaKnown RBP8.95□□□□□ -0.98
VPS13A-203ENST00000360280 HSPE1-MOB4S4R3N1 261 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 GAS6Q14393 721 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 OR5B17Q8NGF7 314 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 ACDQ96AP0 544 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 FAXDC2Q96IV6 333 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 FNIP2Q9P278 1114 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 KLHL21Q9UJP4 597 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 LPLP06858 475 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 RAB35Q15286 201 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 PLPP4Q5VZY2 271 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 PIP5K1AQ99755 562 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 NIFKQ9BYG3 293 aaKnown RBP8.95□□□□□ -0.98
VPS13A-203ENST00000360280 TDP1Q9NUW8 608 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 POT1Q9NUX5 634 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 BHLHE40O14503 412 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 SYN3O14994 580 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 HTRA2O43464 458 aaPredicted RBP8.95□□□□□ -0.98
VPS13A-203ENST00000360280 CHRNA1P02708 482 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 CDK15Q96Q40 435 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 B3GNT5Q9BYG0 378 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 POLMQ9NP87 494 aaPredicted RBP8.95□□□□□ -0.98
VPS13A-203ENST00000360280 POLLQ9UGP5 575 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 DUOX1Q9NRD9 1551 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 SCAMP1O15126 338 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 ITM2AO43736 263 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 INHBEP58166 350 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 EEF1A1P68104 462 aaKnown RBP8.95□□□□□ -0.98
VPS13A-203ENST00000360280 GHRHRQ02643 423 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 EEF1A1P5Q5VTE0 462 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 LINGO4Q6UY18 593 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 SLC16A10Q8TF71 515 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 BIRC7Q96CA5 298 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 FBXO7Q9Y3I1 522 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 KLRK1P26718 216 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 OR4F3Q6IEY1 312 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 OR2AP1Q8NGE2 309 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 B3GALT1Q9Y5Z6 326 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 A8MT66 165 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 PEX12O00623 359 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 KIAA0513O60268 411 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 OAS1P00973 400 aaKnown RBP8.95□□□□□ -0.98
VPS13A-203ENST00000360280 SERINC3Q13530 473 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 TMPRSS9Q7Z410 1059 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 CMIPQ8IY22 773 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms