RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 PLCL2Q9UPR0 1127 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 RP1P56715 2156 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 UNC13CQ8NB66 2214 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 C1orf226A1L170 272 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 CPED1A4D0V7 1026 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 EME2A4GXA9 379 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 EIF4E1BA6NMX2 242 aaKnown RBP13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 PDPK1O15530 556 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 KIF1CO43896 1103 aaKnown RBP13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 BCAS2O75934 225 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 C1QL1O75973 258 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 B3GALT4O96024 378 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 ZCCHC18P0CG32 403 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 CKMT1AP12532 417 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 MYF5P13349 255 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 PPIBP23284 216 aaKnown RBP13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 CSF2RBP32927 897 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 CDKN2CP42773 168 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 ARL4DP49703 201 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 GSK3BP49841 420 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 MTPNP58546 118 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 SKP1P63208 163 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 TRIM25Q14258 630 aaKnown RBP13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 NDUFA9Q16795 377 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 MUM1Q2TAK8 710 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 PROX2Q3B8N5 592 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 GTDC1Q4AE62 458 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 NDUFAF5Q5TEU4 345 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 TMEM214Q6NUQ4 689 aaKnown RBP13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 WDR74Q6RFH5 385 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 DBX2Q6ZNG2 339 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 PRSS42Q7Z5A4 293 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 KMT5CQ86Y97 462 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 MSRB3Q8IXL7 192 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 FAM156AQ8NDB6 213 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 OR4A15Q8NGL6 344 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 N4BP2L2Q92802 583 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 KCTD14Q9BQ13 255 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 ECSITQ9BQ95 431 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 THUMPD3Q9BV44 507 aaKnown RBP13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 TRIM15Q9C019 465 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 SLC25A37Q9NYZ2 338 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 KLHL3Q9UH77 587 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 FBXW2Q9UKT8 454 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 ASB4Q9Y574 426 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 PCDHB14Q9Y5E9 798 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 SLC22A7Q9Y694 548 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 CELSR3Q9NYQ7 3312 aa13.11□□□□□ -0.31
PDLIM5-203ENST00000359265 PCNX2A6NKB5 2137 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 TENM4Q6N022 2769 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 IGHV5-51A0A0C4DH38 117 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 LY6G6EA0A0G2JKS1 128 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 A0A1W2PRB8 838 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 EVPLLA8MZ36 301 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 FKBP6O75344 327 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 AIFM1O95831 613 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 C6orf47O95873 294 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 GSNP06396 782 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 NR2F6P10588 404 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 CD1CP29017 333 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 PTPN6P29350 595 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 BUD31P41223 144 aaPredicted RBP13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 CCNIQ14094 377 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 SELPLGQ14242 412 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 SNCBQ16143 134 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 CLPPQ16740 277 aaPredicted RBP13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 PRTGQ2VWP7 1150 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 DEFB134Q4QY38 66 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 TCTE1Q5JU00 501 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 NIPAL1Q6NVV3 410 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 GUSBP11Q6P575 273 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 ZNF621Q6ZSS3 439 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 IFNEQ86WN2 208 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 MMP21Q8N119 569 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 TRIML2Q8N7C3 387 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 TNIP2Q8NFZ5 429 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 GOT1L1Q8NHS2 421 aaPredicted RBP13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 RHBDD1Q8TEB9 315 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 CIDECQ96AQ7 238 aaPredicted RBP13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 DPYSL5Q9BPU6 564 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 TRIM8Q9BZR9 551 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 ANKHQ9HCJ1 492 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 GIMAP4Q9NUV9 329 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 SEMA5BQ9P283 1151 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 FTSJ1Q9UET6 329 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 CORO2BQ9UQ03 480 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 U3KQA8 63 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 SPACA6W5XKT8 324 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 SCN2AQ99250 2005 aa13.1□□□□□ -0.31
PDLIM5-203ENST00000359265 A0A1W2PR48 441 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 FAM220BPB1ANY3 271 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 ACOT8O14734 319 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 PSMG1O95456 288 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 LDOC1O95751 146 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 IL1RNP18510 177 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 EFNA1P20827 205 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 CSRP1P21291 193 aaKnown RBP13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 CPN2P22792 545 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 HTR1EP28566 365 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 NTSP30990 170 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms