RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 NXNL2Q5VZ03 156 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 KBTBD8Q8NFY9 601 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 GUCD1Q96NT3 240 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 CCDC32Q9BV29 185 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 ELOVL6Q9H5J4 265 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 DCAF13Q9NV06 445 aaKnown RBP17.75■□□□□ 0.43
SNX11-201ENST00000359238 PAQR5Q9NXK6 330 aaPredicted RBP17.75■□□□□ 0.43
SNX11-201ENST00000359238 PRAMEF33A0A0G2JMD5 474 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 ELOVL7A1L3X0 281 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 MGAT4DA6NG13 374 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 SLC31A1O15431 190 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 TRAPPC2P0DI81 140 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 TRAPPC2BP0DI82 140 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 ACADMP11310 421 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 BCKDHAP12694 445 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 IL1RNP18510 177 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 GADD45AP24522 165 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 IGFALSP35858 605 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 IRF8Q02556 426 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 SGCGQ13326 291 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 SMN1Q16637 294 aaKnown RBP17.74■□□□□ 0.43
SNX11-201ENST00000359238 SYT16Q17RD7 645 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 USP39Q53GS9 565 aaKnown RBP17.74■□□□□ 0.43
SNX11-201ENST00000359238 HORMAD1Q86X24 394 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 LRRC56Q8IYG6 542 aaPredicted RBP17.74■□□□□ 0.43
SNX11-201ENST00000359238 POP5Q969H6 163 aaKnown RBP17.74■□□□□ 0.43
SNX11-201ENST00000359238 TEX101Q9BY14 249 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 SLC6A13Q9NSD5 602 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 CA14Q9ULX7 337 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 GPR34Q9UPC5 381 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 U3KQV3 271 aa17.74■□□□□ 0.43
SNX11-201ENST00000359238 GOLGA4Q13439 2230 aaKnown RBP17.74■□□□□ 0.43
SNX11-201ENST00000359238 VEGFDO43915 354 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 DFNA5O60443 496 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 GGTA1PQ4G0N0 100 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 SPANXN4Q5MJ08 99 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 OR10A6Q8NH74 314 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 WDR20Q8TBZ3 569 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 FAM131CQ96AQ9 280 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 TBC1D20Q96BZ9 403 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 RNF170Q96K19 258 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 PPP3R2Q96LZ3 170 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 EBPLQ9BY08 206 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 SLC17A9Q9BYT1 436 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 SLC29A3Q9BZD2 475 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 WDR26Q9H7D7 661 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 FBRSQ9HAH7 460 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 TAS2R9Q9NYW1 312 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 VAPAQ9P0L0 249 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 NDRG4Q9ULP0 352 aaKnown RBP17.73■□□□□ 0.43
SNX11-201ENST00000359238 GON4LQ3T8J9 2241 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 SNRNP200O75643 2136 aaKnown RBP17.73■□□□□ 0.43
SNX11-201ENST00000359238 KNL1Q8NG31 2342 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 H0Y8X5 98 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 ERVH48-1M5A8F1 160 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 CYP4B1P13584 511 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 JUPP14923 745 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 NPPBP16860 134 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 KRT20P35900 424 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 TRIM23P36406 574 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 CYP4F3Q08477 520 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 SPANXN2Q5MJ10 180 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 FRG2Q64ET8 278 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 ZNF438Q7Z4V0 828 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 TSPYL5Q86VY4 417 aaPredicted RBP17.73■□□□□ 0.43
SNX11-201ENST00000359238 SETD6Q8TBK2 473 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 HMGB4Q8WW32 186 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 DMRTB1Q96MA1 342 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 TSSK3Q96PN8 268 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 FRG2BQ96QU4 278 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 SDHCQ99643 169 aaPredicted RBP17.73■□□□□ 0.43
SNX11-201ENST00000359238 DHRS9Q9BPW9 319 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 C1QTNF2Q9BXJ5 285 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 PLSCR3Q9NRY6 295 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 C1orf109Q9NX04 203 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 SNX6Q9UNH7 406 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 BTBD3Q9Y2F9 522 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 VPS13AQ96RL7 3174 aa17.73■□□□□ 0.43
SNX11-201ENST00000359238 HMX3A6NHT5 357 aa17.72■□□□□ 0.43
SNX11-201ENST00000359238 ZSCAN5BA6NJL1 495 aa17.72■□□□□ 0.43
SNX11-201ENST00000359238 M0R082 166 aa17.72■□□□□ 0.43
SNX11-201ENST00000359238 SLC28A1O00337 649 aa17.72■□□□□ 0.43
SNX11-201ENST00000359238 LRATO95237 230 aa17.72■□□□□ 0.43
SNX11-201ENST00000359238 M6PRP20645 277 aa17.72■□□□□ 0.43
SNX11-201ENST00000359238 ACSL1P33121 698 aa17.72■□□□□ 0.43
SNX11-201ENST00000359238 SLC15A1P46059 708 aa17.72■□□□□ 0.43
SNX11-201ENST00000359238 CLDN2P57739 230 aa17.72■□□□□ 0.43
SNX11-201ENST00000359238 TAP2Q03519 686 aa17.72■□□□□ 0.43
SNX11-201ENST00000359238 FAM174BQ3ZCQ3 159 aa17.72■□□□□ 0.43
SNX11-201ENST00000359238 EOGTQ5NDL2 527 aa17.72■□□□□ 0.43
SNX11-201ENST00000359238 CPZQ66K79 652 aa17.72■□□□□ 0.43
SNX11-201ENST00000359238 ZNF517Q6ZMY9 492 aaPredicted RBP17.72■□□□□ 0.43
SNX11-201ENST00000359238 CCDC190Q86UF4 302 aa17.72■□□□□ 0.43
SNX11-201ENST00000359238 AMZ2Q86W34 360 aa17.72■□□□□ 0.43
SNX11-201ENST00000359238 ZNF740Q8NDX6 193 aa17.72■□□□□ 0.43
SNX11-201ENST00000359238 APOLD1Q96LR9 279 aa17.72■□□□□ 0.43
SNX11-201ENST00000359238 THUMPD3Q9BV44 507 aaKnown RBP17.72■□□□□ 0.43
SNX11-201ENST00000359238 C2orf42Q9NWW7 574 aa17.72■□□□□ 0.43
SNX11-201ENST00000359238 MMP17Q9ULZ9 603 aa17.72■□□□□ 0.43
SNX11-201ENST00000359238 ASF1AQ9Y294 204 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms