RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 RDH12Q96NR8 316 aa12.62□□□□□ -0.39
NFIX-201ENST00000358552 DPH2Q9BQC3 489 aaPredicted RBP12.62□□□□□ -0.39
NFIX-201ENST00000358552 NPLQ9BXD5 320 aaPredicted RBP12.62□□□□□ -0.39
NFIX-201ENST00000358552 SEMA6AQ9H2E6 1030 aa12.62□□□□□ -0.39
NFIX-201ENST00000358552 TMEM38AQ9H6F2 299 aa12.62□□□□□ -0.39
NFIX-201ENST00000358552 LHX9Q9NQ69 397 aa12.62□□□□□ -0.39
NFIX-201ENST00000358552 SEMA3GQ9NS98 782 aa12.62□□□□□ -0.39
NFIX-201ENST00000358552 SLC22A7Q9Y694 548 aa12.62□□□□□ -0.39
NFIX-201ENST00000358552 BLACEA4D250 179 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 C7orf72A4D263 438 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 B4DGG1 531 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 H0YAE9 185 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 LAMTOR5O43504 91 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 TRMUO75648 421 aaKnown RBP12.61□□□□□ -0.39
NFIX-201ENST00000358552 TIPRLO75663 272 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 PIAS2O75928 621 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 KCNK5O95279 499 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 GBAP04062 536 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 SMIM10L1P0DMW3 83 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 MPIP34949 423 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 CNR2P34972 360 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 HOXD12P35452 270 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 CHI3L1P36222 383 aaPredicted RBP12.61□□□□□ -0.39
NFIX-201ENST00000358552 GPR3P46089 330 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 ATXN3P54252 364 aaPredicted RBP12.61□□□□□ -0.39
NFIX-201ENST00000358552 PCBP4P57723 403 aaKnown RBP12.61□□□□□ -0.39
NFIX-201ENST00000358552 MERTKQ12866 999 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 ATP6AP1Q15904 470 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 ZNF630Q2M218 657 aaPredicted RBP12.61□□□□□ -0.39
NFIX-201ENST00000358552 C14orf28Q4W4Y0 310 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 LYSMD4Q5XG99 296 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 TTC33Q6PID6 262 aaPredicted RBP12.61□□□□□ -0.39
NFIX-201ENST00000358552 GPR155Q7Z3F1 870 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 GPR141Q7Z602 305 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 PLD3Q8IV08 490 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 CLECL1Q8IZS7 167 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 NUDT8Q8WV74 236 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 ZDHHC12Q96GR4 267 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 SMIM10Q96HG1 83 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 CIB1Q99828 191 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 SLC35A5Q9BS91 424 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 DUSP23Q9BVJ7 150 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 OSBPL10Q9BXB5 764 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 CAAP1Q9H8G2 361 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 LYRM4Q9HD34 91 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 SLC35C2Q9NQQ7 365 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 FAF1Q9UNN5 650 aaPredicted RBP12.61□□□□□ -0.39
NFIX-201ENST00000358552 ENTPD4Q9Y227 616 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 ASB4Q9Y574 426 aa12.61□□□□□ -0.39
NFIX-201ENST00000358552 TDRD6O60522 2096 aaKnown RBP12.61□□□□□ -0.39
NFIX-201ENST00000358552 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 RTCAO00442 366 aaKnown RBP12.6□□□□□ -0.39
NFIX-201ENST00000358552 NUDT21O43809 227 aaKnown RBP12.6□□□□□ -0.39
NFIX-201ENST00000358552 B3GALT2O43825 422 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 TMPRSS11DO60235 418 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 SLITRK5O94991 958 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 C6orf47O95873 294 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 MAOBP27338 520 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 CAPZBP47756 277 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 RAB15P59190 212 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 MC1RQ01726 317 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 ZBED5Q49AG3 693 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 GTDC1Q4AE62 458 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 FCRL6Q6DN72 434 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 ANKRD26P1Q6NSI1 321 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 ZCCHC8Q6NZY4 707 aaKnown RBP12.6□□□□□ -0.39
NFIX-201ENST00000358552 TMEM64Q6YI46 380 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 VN1R4Q7Z5H5 301 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 AMIGO2Q86SJ2 522 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 TMEFF1Q8IYR6 380 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 DHRSXQ8N5I4 330 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 ZNF420Q8TAQ5 688 aaPredicted RBP12.6□□□□□ -0.39
NFIX-201ENST00000358552 PPP1R14BQ96C90 147 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 CNDP2Q96KP4 475 aaKnown RBP12.6□□□□□ -0.39
NFIX-201ENST00000358552 TEFMQ96QE5 360 aaKnown RBP12.6□□□□□ -0.39
NFIX-201ENST00000358552 NRTNQ99748 197 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 CCDC3Q9BQI4 270 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 ADI1Q9BV57 179 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 ASPSCR1Q9BZE9 553 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 IKZF5Q9H5V7 419 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 SLC6A13Q9NSD5 602 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 UTS2RQ9UKP6 389 aa12.6□□□□□ -0.39
NFIX-201ENST00000358552 TMEM247A6NEH6 219 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 PROM1O43490 865 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 PROS1P07225 676 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 IFI6P09912 130 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 ALOX12P18054 663 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 CDH2P19022 906 aaPredicted RBP12.59□□□□□ -0.39
NFIX-201ENST00000358552 CDH3P22223 829 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 PCGF2P35227 344 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 ALDH9A1P49189 494 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 PRIM2P49643 509 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 GNA13Q14344 377 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 MYBPC3Q14896 1274 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 CEBPEQ15744 281 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 NDUFA9Q16795 377 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 ZNF385BQ569K4 471 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 HMBOX1Q6NT76 420 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 BMP8AQ7Z5Y6 402 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 C1orf210Q8IVY1 113 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms