RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 FAM136AQ96C01 138 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 SEC22CQ9BRL7 303 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 GPR88Q9GZN0 384 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 POLHQ9Y253 713 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 SCAMP3O14828 347 aaKnown RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 SPTLC1O15269 473 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 VTNP04004 478 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 DRD2P14416 443 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 MAGEA11P43364 429 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 PSMA6P60900 246 aaKnown RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 HERV-K104P61576 105 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 HSD11B2P80365 405 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 MAPK14Q16539 360 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 NTRK2Q16620 822 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 SKA3Q8IX90 412 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 OR2L8Q8NGY9 312 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 DCAF13Q9NV06 445 aaKnown RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 MGAT4CQ9UBM8 478 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 WASF3Q9UPY6 502 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 MAP4K5Q9Y4K4 846 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 CD9P21926 228 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 FGL2Q14314 439 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 HBMQ6B0K9 141 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 TRIM46Q7Z4K8 759 aa6.33□□□□□ -1.4
VPS13B-202ENST00000357162 FBXO16Q8IX29 292 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 GJD4Q96KN9 370 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-202ENST00000357162 KIAA0513O60268 411 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 PCDH8O95206 1070 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 C1RP00736 705 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 JUPP14923 745 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 ENGP17813 658 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 FRKP42685 505 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 GALK2Q01415 458 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 NRG1Q02297 640 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 MLLT11Q13015 90 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 ATAT1Q5SQI0 421 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 AADACL4Q5VUY2 407 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 FAM180AQ6UWF9 173 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 FANK1Q8TC84 345 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 SYT3Q9BQG1 590 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 CEP41Q9BYV8 373 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 METTL8Q9H825 291 aaKnown RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 CDC14AQ9UNH5 594 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 HCRTR2O43614 444 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 MMP2P08253 660 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 HSPA7P48741 367 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 GALEQ14376 348 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 ARL9Q6T311 187 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 SLC24A5Q71RS6 500 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 ELP4Q96EB1 424 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 TXN2Q99757 166 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 SULT4A1Q9BR01 284 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 DPEP2Q9H4A9 486 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 KLHL9Q9P2J3 617 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 FZD4Q9ULV1 537 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 TCRBV7S2A1N4TA0A589 114 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 SSX5O60225 188 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 RBMXL2O75526 392 aaKnown RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 EGFP01133 1207 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 IFI30P13284 250 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 HENMT1Q5T8I9 393 aaKnown RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 CLEC10AQ8IUN9 316 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 SH3YL1Q96HL8 342 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 HIST1H2AAQ96QV6 131 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 OR14A2Q96R54 314 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 STARD7Q9NQZ5 370 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 EDARQ9UNE0 448 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 EME2A4GXA9 379 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 H3BMQ9 156 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 LCMT2O60294 686 aaKnown RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 TSPAN15O95858 294 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 PPP3CBP16298 524 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 C1QTNF8P60827 252 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 BAMBIQ13145 260 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 RAB11BQ15907 218 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 HES5Q5TA89 166 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 CD276Q5ZPR3 534 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 RPL22L1Q6P5R6 122 aaKnown RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 LIX1LQ8IVB5 337 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 NXPE1Q8N323 547 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 CCDC71LQ8N9Z2 235 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 SLC2A12Q8TD20 617 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 ALPK1Q96QP1 1244 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 C12orf10Q9HB07 376 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 EIF2B4Q9UI10 523 aaKnown RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 CIB4A0PJX0 185 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 KIAA0355O15063 1070 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 DDOSTP39656 456 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 PPM1JQ5JR12 505 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 CATSPERGQ6ZRH7 1159 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 HIST2H3AQ71DI3 136 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 SLC35F5Q8WV83 523 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 MUS81Q96NY9 551 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 BTBD2Q9BX70 525 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 GSX2Q9BZM3 304 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 GPR137BO60478 399 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 TLR5O60602 858 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 SBK2P0C263 348 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 NFYAP23511 347 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms