RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 CBFA2T3O75081 653 aa17.15■□□□□ 0.34
SMARCD3-202ENST00000356800 GUCY1B2O75343 617 aa17.15■□□□□ 0.34
SMARCD3-202ENST00000356800 GP1BAP07359 652 aa17.15■□□□□ 0.34
SMARCD3-202ENST00000356800 MSX2P35548 267 aaPredicted RBP17.15■□□□□ 0.34
SMARCD3-202ENST00000356800 SELPLGQ14242 412 aa17.15■□□□□ 0.34
SMARCD3-202ENST00000356800 CLPPQ16740 277 aaPredicted RBP17.15■□□□□ 0.34
SMARCD3-202ENST00000356800 RUNDC3AQ59EK9 446 aa17.15■□□□□ 0.34
SMARCD3-202ENST00000356800 TMTC4Q5T4D3 741 aa17.15■□□□□ 0.34
SMARCD3-202ENST00000356800 CSF3RQ99062 836 aa17.15■□□□□ 0.34
SMARCD3-202ENST00000356800 ALG2Q9H553 416 aa17.15■□□□□ 0.34
SMARCD3-202ENST00000356800 ANKHQ9HCJ1 492 aa17.15■□□□□ 0.34
SMARCD3-202ENST00000356800 LYRM4Q9HD34 91 aa17.15■□□□□ 0.34
SMARCD3-202ENST00000356800 EHD3Q9NZN3 535 aa17.15■□□□□ 0.34
SMARCD3-202ENST00000356800 NCDNQ9UBB6 729 aa17.15■□□□□ 0.34
SMARCD3-202ENST00000356800 A0A0A6YYC8 382 aaPredicted RBP17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 I3L1I5 382 aaPredicted RBP17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 FKBP6O75344 327 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 RDH16O75452 317 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 OR2B3O76000 313 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 PSMG1O95456 288 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 CPSF4O95639 269 aaKnown RBP17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 C1QCP02747 245 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 DDX5P17844 614 aaKnown RBP17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 NBL1P41271 181 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 GCGRP47871 477 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 TNFRSF17Q02223 184 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 LIPEQ05469 1076 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 BNIP2Q12982 314 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 GARNL3Q5VVW2 1013 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 AAGABQ6PD74 315 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 CA13Q8N1Q1 262 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 NATD1Q8N6N6 113 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 EXOSC8Q96B26 276 aaKnown RBP17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 ZNF501Q96CX3 271 aaPredicted RBP17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 GBP5Q96PP8 586 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 PANX1Q96RD7 426 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 IKZF5Q9H5V7 419 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 IRAK4Q9NWZ3 460 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 PHF11Q9UIL8 331 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 MUC6Q6W4X9 2439 aa17.14■□□□□ 0.33
SMARCD3-202ENST00000356800 C1orf226A1L170 272 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 KRT36O76013 467 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 C6orf47O95873 294 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 NR2F6P10588 404 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 FRKP42685 505 aaPredicted RBP17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 EMP3P54852 163 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 PCBP4P57723 403 aaKnown RBP17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 MTPNP58546 118 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 FAM53BQ14153 422 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 GRM7Q14831 915 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 FXNQ16595 210 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 NDUFA9Q16795 377 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 SLC48A1Q6P1K1 146 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 B3GNT8Q7Z7M8 397 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 AURKBQ96GD4 344 aaPredicted RBP17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 TRIM4Q9C037 500 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 PCDHAC1Q9H158 963 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 MUC13Q9H3R2 512 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 FGF21Q9NSA1 209 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 UTS2RQ9UKP6 389 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 FER1L5A0AVI2 2057 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 C4orf47A7E2U8 309 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 LRP3O75074 770 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 ZCCHC18P0CG32 403 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 CPN2P22792 545 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 HTR1EP28566 365 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 GSK3BP49841 420 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 HBA1P69905 142 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 PRAMEF17Q5VTA0 474 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 PTRH1Q86Y79 214 aaKnown RBP17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 OR4A15Q8NGL6 344 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 GOT1L1Q8NHS2 421 aaPredicted RBP17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 PHF12Q96QT6 1004 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 CPPED1Q9BRF8 314 aaPredicted RBP17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 NPLQ9BXD5 320 aaPredicted RBP17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 SLC35C2Q9NQQ7 365 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 STX18Q9P2W9 335 aaKnown RBP17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 GMEB1Q9Y692 573 aa17.13■□□□□ 0.33
SMARCD3-202ENST00000356800 A0A1W2PRB8 838 aa17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 A0A1W2PS29 197 aa17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 AGRPO00253 132 aa17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 CYR61O00622 381 aa17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 PDPK1O15530 556 aa17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 GDF9O60383 454 aa17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 NSA2O95478 260 aaKnown RBP17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 ANP32DO95626 131 aa17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 PDX1P52945 283 aa17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 ITGA1P56199 1179 aa17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 ZFP36L1Q07352 338 aaKnown RBP17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 GAB1Q13480 694 aa17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 SPIDRQ14159 915 aa17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 RCN1Q15293 331 aa17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 PHF19Q5T6S3 580 aa17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 TMEM52Q8NDY8 209 aa17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 BHLHE22Q8NFJ8 381 aaPredicted RBP17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 SLC26A7Q8TE54 656 aa17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 CNRIP1Q96F85 164 aaPredicted RBP17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 KCTD14Q9BQ13 255 aaPredicted RBP17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 THUMPD3Q9BV44 507 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms