RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 SDC3O75056 442 aa15.04■□□□□ -0
RTN3-205ENST00000356000 TOXO94900 526 aa15.04■□□□□ -0
RTN3-205ENST00000356000 CCNB2O95067 398 aa15.04■□□□□ -0
RTN3-205ENST00000356000 JCHAINP01591 159 aa15.04■□□□□ -0
RTN3-205ENST00000356000 SPP1P10451 314 aa15.04■□□□□ -0
RTN3-205ENST00000356000 LCP1P13796 627 aa15.04■□□□□ -0
RTN3-205ENST00000356000 GPR143P51810 404 aa15.04■□□□□ -0
RTN3-205ENST00000356000 MAZP56270 477 aaKnown RBP15.04■□□□□ -0
RTN3-205ENST00000356000 JAG1P78504 1218 aa15.04■□□□□ -0
RTN3-205ENST00000356000 SIGLEC14Q08ET2 396 aa15.04■□□□□ -0
RTN3-205ENST00000356000 ABHD18Q0P651 414 aa15.04■□□□□ -0
RTN3-205ENST00000356000 MAP4K2Q12851 820 aa15.04■□□□□ -0
RTN3-205ENST00000356000 MLLT11Q13015 90 aaPredicted RBP15.04■□□□□ -0
RTN3-205ENST00000356000 FAM174BQ3ZCQ3 159 aa15.04■□□□□ -0
RTN3-205ENST00000356000 DCAF15Q66K64 600 aa15.04■□□□□ -0
RTN3-205ENST00000356000 TMEM91Q6ZNR0 172 aa15.04■□□□□ -0
RTN3-205ENST00000356000 TMEM130Q8N3G9 435 aa15.04■□□□□ -0
RTN3-205ENST00000356000 FBXO39Q8N4B4 442 aa15.04■□□□□ -0
RTN3-205ENST00000356000 PNPLA1Q8N8W4 532 aa15.04■□□□□ -0
RTN3-205ENST00000356000 C1orf127Q8N9H9 656 aa15.04■□□□□ -0
RTN3-205ENST00000356000 OR4A15Q8NGL6 344 aa15.04■□□□□ -0
RTN3-205ENST00000356000 SPATA22Q8NHS9 363 aa15.04■□□□□ -0
RTN3-205ENST00000356000 KCTD7Q96MP8 289 aa15.04■□□□□ -0
RTN3-205ENST00000356000 DMRTA2Q96SC8 542 aa15.04■□□□□ -0
RTN3-205ENST00000356000 FEVQ99581 238 aa15.04■□□□□ -0
RTN3-205ENST00000356000 TFB2MQ9H5Q4 396 aaKnown RBP15.04■□□□□ -0
RTN3-205ENST00000356000 SLC6A13Q9NSD5 602 aa15.04■□□□□ -0
RTN3-205ENST00000356000 CLEC2DQ9UHP7 191 aa15.04■□□□□ -0
RTN3-205ENST00000356000 AAR2Q9Y312 384 aaKnown RBP15.04■□□□□ -0
RTN3-205ENST00000356000 NUBP2Q9Y5Y2 271 aa15.04■□□□□ -0
RTN3-205ENST00000356000 DENND4AQ7Z401 1863 aa15.04■□□□□ -0
RTN3-205ENST00000356000 DDTLA6NHG4 134 aaPredicted RBP15.04■□□□□ -0
RTN3-205ENST00000356000 ZNF729A6NN14 1252 aaPredicted RBP15.04■□□□□ -0
RTN3-205ENST00000356000 WNT9AO14904 365 aa15.04■□□□□ -0
RTN3-205ENST00000356000 CXCL2P19875 107 aa15.04■□□□□ -0
RTN3-205ENST00000356000 CTBP2P56545 445 aa15.04■□□□□ -0
RTN3-205ENST00000356000 CACNB2Q08289 660 aaPredicted RBP15.04■□□□□ -0
RTN3-205ENST00000356000 STX4Q12846 297 aa15.04■□□□□ -0
RTN3-205ENST00000356000 EXOC3L2Q2M3D2 409 aa15.04■□□□□ -0
RTN3-205ENST00000356000 FAM180BQ6P0A1 224 aa15.04■□□□□ -0
RTN3-205ENST00000356000 ALKAL2Q6UX46 152 aa15.04■□□□□ -0
RTN3-205ENST00000356000 PDZD9Q8IXQ8 264 aa15.04■□□□□ -0
RTN3-205ENST00000356000 GPR150Q8NGU9 434 aa15.04■□□□□ -0
RTN3-205ENST00000356000 PARK7Q99497 189 aaKnown RBP15.04■□□□□ -0
RTN3-205ENST00000356000 CRB3Q9BUF7 120 aa15.04■□□□□ -0
RTN3-205ENST00000356000 PRKD2Q9BZL6 878 aa15.04■□□□□ -0
RTN3-205ENST00000356000 POLR2J2Q9GZM3 115 aaKnown RBP15.04■□□□□ -0
RTN3-205ENST00000356000 RPS6KA6Q9UK32 745 aa15.04■□□□□ -0
RTN3-205ENST00000356000 A0A0U1RQF3 1178 aa15.03■□□□□ -0
RTN3-205ENST00000356000 FFAR3O14843 346 aa15.03■□□□□ -0
RTN3-205ENST00000356000 GPR42O15529 346 aa15.03■□□□□ -0
RTN3-205ENST00000356000 SPI1P17947 270 aa15.03■□□□□ -0
RTN3-205ENST00000356000 PVALBP20472 110 aaPredicted RBP15.03■□□□□ -0
RTN3-205ENST00000356000 OGNP20774 298 aaKnown RBP15.03■□□□□ -0
RTN3-205ENST00000356000 SCNN1AP37088 669 aa15.03■□□□□ -0
RTN3-205ENST00000356000 CRKP46108 304 aa15.03■□□□□ -0
RTN3-205ENST00000356000 ZP1P60852 638 aa15.03■□□□□ -0
RTN3-205ENST00000356000 MC2RQ01718 297 aa15.03■□□□□ -0
RTN3-205ENST00000356000 LIPKQ5VXJ0 399 aa15.03■□□□□ -0
RTN3-205ENST00000356000 KDELC2Q7Z4H8 507 aa15.03■□□□□ -0
RTN3-205ENST00000356000 FGD2Q7Z6J4 655 aa15.03■□□□□ -0
RTN3-205ENST00000356000 OR52P1PQ8NH57 321 aa15.03■□□□□ -0
RTN3-205ENST00000356000 CHURC1Q8WUH1 139 aa15.03■□□□□ -0
RTN3-205ENST00000356000 C1QTNF3Q9BXJ4 246 aa15.03■□□□□ -0
RTN3-205ENST00000356000 HDHD2Q9H0R4 259 aa15.03■□□□□ -0
RTN3-205ENST00000356000 ABCG5Q9H222 651 aa15.03■□□□□ -0
RTN3-205ENST00000356000 MARK1Q9P0L2 795 aa15.03■□□□□ -0
RTN3-205ENST00000356000 SMIM30A4D0T7 59 aa15.03■□□□□ -0
RTN3-205ENST00000356000 ANKDD1BA6NHY2 528 aa15.03■□□□□ -0
RTN3-205ENST00000356000 ADAMDEC1O15204 470 aa15.03■□□□□ -0
RTN3-205ENST00000356000 POP4O95707 220 aaKnown RBP15.03■□□□□ -0
RTN3-205ENST00000356000 GLP2RO95838 553 aa15.03■□□□□ -0
RTN3-205ENST00000356000 SMPD1P17405 629 aa15.03■□□□□ -0
RTN3-205ENST00000356000 FDXRP22570 491 aa15.03■□□□□ -0
RTN3-205ENST00000356000 GPX4P36969 197 aaPredicted RBP15.03■□□□□ -0
RTN3-205ENST00000356000 VEGFCP49767 419 aa15.03■□□□□ -0
RTN3-205ENST00000356000 NUBP1P53384 320 aa15.03■□□□□ -0
RTN3-205ENST00000356000 FBXO48Q5FWF7 155 aa15.03■□□□□ -0
RTN3-205ENST00000356000 OR7E24Q6IFN5 339 aa15.03■□□□□ -0
RTN3-205ENST00000356000 RBMS3Q6XE24 437 aaKnown RBP15.03■□□□□ -0
RTN3-205ENST00000356000 CILP2Q8IUL8 1156 aa15.03■□□□□ -0
RTN3-205ENST00000356000 TMEM68Q96MH6 324 aa15.03■□□□□ -0
RTN3-205ENST00000356000 NELL2Q99435 816 aa15.03■□□□□ -0
RTN3-205ENST00000356000 DPAGT1Q9H3H5 408 aa15.03■□□□□ -0
RTN3-205ENST00000356000 ZNF70Q9UC06 446 aaPredicted RBP15.03■□□□□ -0
RTN3-205ENST00000356000 POFUT2Q9Y2G5 429 aa15.03■□□□□ -0
RTN3-205ENST00000356000 MGAMO43451 1857 aa15.02■□□□□ -0
RTN3-205ENST00000356000 PLSCR5A0PG75 271 aa15.02■□□□□ -0
RTN3-205ENST00000356000 SUPT3HB4E1H0 165 aa15.02■□□□□ -0
RTN3-205ENST00000356000 J3KR12 359 aa15.02■□□□□ -0
RTN3-205ENST00000356000 L7N2F9 121 aa15.02■□□□□ -0
RTN3-205ENST00000356000 SNAPC5O75971 98 aa15.02■□□□□ -0
RTN3-205ENST00000356000 VTNP04004 478 aa15.02■□□□□ -0
RTN3-205ENST00000356000 IL6P05231 212 aa15.02■□□□□ -0
RTN3-205ENST00000356000 HMBSP08397 361 aa15.02■□□□□ -0
RTN3-205ENST00000356000 ST3GAL2Q16842 350 aa15.02■□□□□ -0
RTN3-205ENST00000356000 USP39Q53GS9 565 aaKnown RBP15.02■□□□□ -0
RTN3-205ENST00000356000 INTS6LQ5JSJ4 861 aaKnown RBP15.02■□□□□ -0
RTN3-205ENST00000356000 HAGHLQ6PII5 290 aaPredicted RBP15.02■□□□□ -0
RTN3-205ENST00000356000 CATSPERGQ6ZRH7 1159 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms