RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 MAZP56270 477 aaKnown RBP24.32■■□□□ 1.48
CLK2-201ENST00000355560 SNRPNP63162 240 aaKnown RBP24.32■■□□□ 1.48
CLK2-201ENST00000355560 CDK6Q00534 326 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 ZNF630Q2M218 657 aaPredicted RBP24.32■■□□□ 1.48
CLK2-201ENST00000355560 CYBRD1Q53TN4 286 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 FRMPD2BQ6IN97 320 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 AMDHD1Q96NU7 426 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 LOC105369274A0A096LPK9 316 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 LOC102723532A0A0G2JNH3 316 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 SUV39H1O43463 412 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 E2F6O75461 281 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 FABP3P05413 133 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 DCNP07585 359 aaKnown RBP24.32■■□□□ 1.48
CLK2-201ENST00000355560 ALDH3A2P51648 485 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 NCBP2P52298 156 aaKnown RBP eCLIP24.32■■□□□ 1.487e-9■■■□□ 18.5
CLK2-201ENST00000355560 DSTNP60981 165 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 PPP1R8Q12972 351 aaKnown RBP24.32■■□□□ 1.48
CLK2-201ENST00000355560 DAG1Q14118 895 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 CEACAM20Q6UY09 585 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 ZNF438Q7Z4V0 828 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 OR4N4Q8N0Y3 316 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 SVOPLQ8N434 492 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 PSMA8Q8TAA3 256 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 LMX1AQ8TE12 382 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 MAPKAP1Q9BPZ7 522 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 LYARQ9NX58 379 aaKnown RBP24.32■■□□□ 1.48
CLK2-201ENST00000355560 CEP192Q8TEP8 1941 aa24.32■■□□□ 1.48
CLK2-201ENST00000355560 DPPA5A6NC42 116 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 hCG_2039718K7EN88 272 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 VLDLRP98155 873 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 MYBPC1Q00872 1141 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 MLLT1Q03111 559 aaPredicted RBP24.31■■□□□ 1.48
CLK2-201ENST00000355560 EEF1A2Q05639 463 aaKnown RBP24.31■■□□□ 1.48
CLK2-201ENST00000355560 ZC3H7AQ8IWR0 971 aaKnown RBP24.31■■□□□ 1.48
CLK2-201ENST00000355560 HS3ST5Q8IZT8 346 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 RERGQ96A58 199 aaPredicted RBP24.31■■□□□ 1.48
CLK2-201ENST00000355560 THAP11Q96EK4 314 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 BBS4Q96RK4 519 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 DOLKQ9UPQ8 538 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 U3KQV3 271 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 A6NHS1 94 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 PLOD2O00469 737 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 PROM1O43490 865 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 NOBOXO60393 691 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 B4GALT2O60909 372 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 SNAP29O95721 258 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 OPN1SWP03999 348 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 ALPLP05186 524 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 ARAFP10398 606 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 GPC1P35052 558 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 SUZ12Q15022 739 aaKnown RBP24.31■■□□□ 1.48
CLK2-201ENST00000355560 KRT80Q6KB66 452 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 SLC48A1Q6P1K1 146 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 TNFAIP8L2Q6P589 184 aaPredicted RBP24.31■■□□□ 1.48
CLK2-201ENST00000355560 CAMKVQ8NCB2 501 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 CYGBQ8WWM9 190 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 PDP2Q9P2J9 529 aa24.31■■□□□ 1.48
CLK2-201ENST00000355560 SPAG17Q6Q759 2223 aa24.3■■□□□ 1.48
CLK2-201ENST00000355560 COL6A3P12111 3177 aa24.3■■□□□ 1.48
CLK2-201ENST00000355560 URADA6NGE7 173 aa24.3■■□□□ 1.48
CLK2-201ENST00000355560 SH3BP5O60239 455 aa24.3■■□□□ 1.48
CLK2-201ENST00000355560 GNAO1P09471 354 aa24.3■■□□□ 1.48
CLK2-201ENST00000355560 BCKDHBP21953 392 aa24.3■■□□□ 1.48
CLK2-201ENST00000355560 CCT3P49368 545 aaKnown RBP24.3■■□□□ 1.48
CLK2-201ENST00000355560 RELAQ04206 551 aa24.3■■□□□ 1.48
CLK2-201ENST00000355560 TP53BP2Q13625 1128 aa24.3■■□□□ 1.48
CLK2-201ENST00000355560 SLC36A3Q495N2 470 aa24.3■■□□□ 1.48
CLK2-201ENST00000355560 ARMC6Q6NXE6 501 aa24.3■■□□□ 1.48
CLK2-201ENST00000355560 SZRD1Q7Z422 152 aa24.3■■□□□ 1.48
CLK2-201ENST00000355560 C6orf120Q7Z4R8 191 aa24.3■■□□□ 1.48
CLK2-201ENST00000355560 GKN2Q86XP6 184 aa24.3■■□□□ 1.48
CLK2-201ENST00000355560 ST13P4Q8IZP2 240 aaPredicted RBP24.3■■□□□ 1.48
CLK2-201ENST00000355560 HORMAD2Q8N7B1 307 aa24.3■■□□□ 1.48
CLK2-201ENST00000355560 ZFP28Q8NHY6 868 aa24.3■■□□□ 1.48
CLK2-201ENST00000355560 CNRIP1Q96F85 164 aaPredicted RBP24.3■■□□□ 1.48
CLK2-201ENST00000355560 ENTPD4Q9Y227 616 aa24.3■■□□□ 1.48
CLK2-201ENST00000355560 EML5Q05BV3 1969 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 TNFAIP8O95379 198 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 DCTP40126 519 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 CXCL12P48061 93 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 DEFB134Q4QY38 66 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 OR52E8Q6IFG1 317 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 RNF44Q7L0R7 432 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 TMEM179BQ7Z7N9 219 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 TMEFF1Q8IYR6 380 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 TRAPPC9Q96Q05 1148 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 DOHHQ9BU89 302 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 BAG5Q9UL15 447 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 ANGPT4Q9Y264 503 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 SIT1Q9Y3P8 196 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 TMEM229AB2RXF0 380 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 H0YGG7 62 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 EIF2S1P05198 315 aaKnown RBP24.29■■□□□ 1.48
CLK2-201ENST00000355560 ARF3P61204 181 aaPredicted RBP24.29■■□□□ 1.48
CLK2-201ENST00000355560 KCNJ10P78508 379 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 ZNF750Q32MQ0 723 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 OR2T5Q6IEZ7 315 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 UBALD2Q8IYN6 164 aa24.29■■□□□ 1.48
CLK2-201ENST00000355560 DHRSXQ8N5I4 330 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms