RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 TERF2Q15554 542 aa14.61□□□□□ -0.07
DDX55-202ENST00000354291 AGTRAPQ6RW13 159 aa14.61□□□□□ -0.07
DDX55-202ENST00000354291 LIX1Q8N485 282 aa14.61□□□□□ -0.07
DDX55-202ENST00000354291 UTP15Q8TED0 518 aaKnown RBP14.61□□□□□ -0.07
DDX55-202ENST00000354291 TMEM158Q8WZ71 300 aa14.61□□□□□ -0.07
DDX55-202ENST00000354291 LRRC39Q96DD0 335 aa14.61□□□□□ -0.07
DDX55-202ENST00000354291 SGCZQ96LD1 299 aa14.61□□□□□ -0.07
DDX55-202ENST00000354291 DACH2Q96NX9 599 aa14.61□□□□□ -0.07
DDX55-202ENST00000354291 SECISBP2Q96T21 854 aaKnown RBP14.61□□□□□ -0.07
DDX55-202ENST00000354291 TRIM54Q9BYV2 358 aa14.61□□□□□ -0.07
DDX55-202ENST00000354291 SLC6A15Q9H2J7 730 aa14.61□□□□□ -0.07
DDX55-202ENST00000354291 KCNF1Q9H3M0 494 aa14.61□□□□□ -0.07
DDX55-202ENST00000354291 ADAMTS6Q9UKP5 1117 aa14.61□□□□□ -0.07
DDX55-202ENST00000354291 CORO1CQ9ULV4 474 aaPredicted RBP14.61□□□□□ -0.07
DDX55-202ENST00000354291 PPIEQ9UNP9 301 aaKnown RBP14.61□□□□□ -0.07
DDX55-202ENST00000354291 ARHGAP21Q5T5U3 1957 aa14.6□□□□□ -0.07
DDX55-202ENST00000354291 CHD3Q12873 2000 aaKnown RBP14.6□□□□□ -0.07
DDX55-202ENST00000354291 CNOT4O95628 575 aaKnown RBP14.6□□□□□ -0.07
DDX55-202ENST00000354291 RFPL3SP0C7P2 107 aa14.6□□□□□ -0.07
DDX55-202ENST00000354291 TIMP3P35625 211 aa14.6□□□□□ -0.07
DDX55-202ENST00000354291 CCR8P51685 355 aa14.6□□□□□ -0.07
DDX55-202ENST00000354291 CDKN2DP55273 166 aa14.6□□□□□ -0.07
DDX55-202ENST00000354291 DR1Q01658 176 aa14.6□□□□□ -0.07
DDX55-202ENST00000354291 PDAP1Q13442 181 aaKnown RBP14.6□□□□□ -0.07
DDX55-202ENST00000354291 ACSF3Q4G176 576 aaPredicted RBP14.6□□□□□ -0.07
DDX55-202ENST00000354291 RBM20Q5T481 1227 aaKnown RBP14.6□□□□□ -0.07
DDX55-202ENST00000354291 TEDDM1Q5T9Z0 273 aa14.6□□□□□ -0.07
DDX55-202ENST00000354291 HSDL2Q6YN16 418 aa14.6□□□□□ -0.07
DDX55-202ENST00000354291 IGDCC3Q8IVU1 814 aa14.6□□□□□ -0.07
DDX55-202ENST00000354291 KLHL7Q8IXQ5 586 aa14.6□□□□□ -0.07
DDX55-202ENST00000354291 LINGO1Q96FE5 620 aa14.6□□□□□ -0.07
DDX55-202ENST00000354291 HAUS8Q9BT25 410 aa14.6□□□□□ -0.07
DDX55-202ENST00000354291 VWA7Q9Y334 891 aa14.6□□□□□ -0.07
DDX55-202ENST00000354291 ATG4BQ9Y4P1 393 aa14.6□□□□□ -0.07
DDX55-202ENST00000354291 MMACHCQ9Y4U1 282 aa14.6□□□□□ -0.07
DDX55-202ENST00000354291 PCDHGB3Q9Y5G1 929 aa14.6□□□□□ -0.07
DDX55-202ENST00000354291 C15orf38-AP3S2A0A0A6YYH1 394 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 SH3D21A4FU49 640 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 MBD3L4A6NDZ8 208 aaPredicted RBP14.59□□□□□ -0.07
DDX55-202ENST00000354291 MBD3L5A6NJ08 208 aaPredicted RBP14.59□□□□□ -0.07
DDX55-202ENST00000354291 CLDN4O14493 209 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 IFNA2P01563 188 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 ELK3P41970 407 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 HK2P52789 917 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 AP1S2P56377 157 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 GNG11P61952 73 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 PHKG1Q16816 387 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 PODNL1Q6PEZ8 512 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 LCTLQ6UWM7 567 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 MBOAT1Q6ZNC8 495 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 CREG2Q8IUH2 290 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 LACC1Q8IV20 430 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 CA13Q8N1Q1 262 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 GOLM1Q8NBJ4 401 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 NEIL3Q8TAT5 605 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 SMPDL3BQ92485 455 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 ANP32BQ92688 251 aaKnown RBP14.59□□□□□ -0.07
DDX55-202ENST00000354291 CFAP36Q96G28 342 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 CCL19Q99731 98 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 SGPP1Q9BX95 441 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 CLK4Q9HAZ1 481 aaKnown RBP14.59□□□□□ -0.07
DDX55-202ENST00000354291 SAR1BQ9Y6B6 198 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 CLCA3PQ9Y6N3 262 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 CUBNO60494 3623 aa14.59□□□□□ -0.07
DDX55-202ENST00000354291 MYOCOSA0A1B0GUC4 107 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 CCDC188H7C350 402 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 ZNF354AO60765 605 aaPredicted RBP14.58□□□□□ -0.08
DDX55-202ENST00000354291 IFNA16P05015 189 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 NPPBP16860 134 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 CTSSP25774 331 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 PAFAH1B1P43034 410 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 ARL4CP56559 192 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 KCNJ2P63252 427 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 SLC13A2Q13183 592 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 FRG1Q14331 258 aaKnown RBP14.58□□□□□ -0.08
DDX55-202ENST00000354291 HP1BP3Q5SSJ5 553 aaPredicted RBP14.58□□□□□ -0.08
DDX55-202ENST00000354291 DUPD1Q68J44 220 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 FAM45BPQ6NSW5 357 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 OPN5Q6U736 354 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 TBC1D19Q8N5T2 526 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 GPATCH11Q8N954 259 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 NT5CQ8TCD5 201 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 FAM45AQ8TCE6 357 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 ATL1Q8WXF7 558 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 ISL2Q96A47 359 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 HSPBAP1Q96EW2 488 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 JSRP1Q96MG2 331 aaPredicted RBP14.58□□□□□ -0.08
DDX55-202ENST00000354291 RBM24Q9BX46 236 aaKnown RBP14.58□□□□□ -0.08
DDX55-202ENST00000354291 KLHL31Q9H511 634 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 UBTD1Q9HAC8 227 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 PRTFDC1Q9NRG1 225 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 ARL15Q9NXU5 204 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 CHMP2BQ9UQN3 213 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 TEX264Q9Y6I9 313 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 KIAA1549Q9HCM3 1950 aa14.58□□□□□ -0.08
DDX55-202ENST00000354291 TRBC2A0A5B9 178 aa14.57□□□□□ -0.08
DDX55-202ENST00000354291 URADA6NGE7 173 aa14.57□□□□□ -0.08
DDX55-202ENST00000354291 TGFBR3LH3BV60 316 aa14.57□□□□□ -0.08
DDX55-202ENST00000354291 ENO2P09104 434 aaPredicted RBP14.57□□□□□ -0.08
DDX55-202ENST00000354291 NID1P14543 1247 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms