RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 SLC22A11Q9NSA0 550 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 TRAPPC4Q9Y296 219 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 PTCH2Q9Y6C5 1203 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 WNK2Q9Y3S1 2297 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 PTPRZ1P23471 2315 aaPredicted RBP4.85□□□□□ -1.63
SKP1-202ENST00000353411 KIAA1217Q5T5P2 1943 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 SLC7A4O43246 635 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 ALPPP05187 535 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 NMBRP28336 390 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 BUD31P41223 144 aaPredicted RBP4.85□□□□□ -1.63
SKP1-202ENST00000353411 PGM5Q15124 567 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.85□□□□□ -1.63
SKP1-202ENST00000353411 PDSS1Q5T2R2 415 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 OR10K2Q6IF99 312 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 C1orf52Q8N6N3 182 aaKnown RBP4.85□□□□□ -1.63
SKP1-202ENST00000353411 GRIN3AQ8TCU5 1115 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 RNF141Q8WVD5 230 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 AUTS2Q8WXX7 1259 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 PPCDCQ96CD2 204 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 SFXN2Q96NB2 322 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 OR10A4Q9H209 315 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 AGO4Q9HCK5 861 aaKnown RBP4.85□□□□□ -1.63
SKP1-202ENST00000353411 TUBG2Q9NRH3 451 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 GAR1Q9NY12 217 aaKnown RBP4.85□□□□□ -1.63
SKP1-202ENST00000353411 NPEPPSL1A6NEC2 478 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 PSMD9O00233 223 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 TCAPO15273 167 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 ZNF821O75541 412 aaPredicted RBP4.84□□□□□ -1.63
SKP1-202ENST00000353411 NTSP30990 170 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 RPL9P32969 192 aaKnown RBP4.84□□□□□ -1.63
SKP1-202ENST00000353411 FBXW4P57775 412 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 POLR2GP62487 172 aaKnown RBP eCLIP4.84□□□□□ -1.63
SKP1-202ENST00000353411 PPP1R8Q12972 351 aaKnown RBP4.84□□□□□ -1.63
SKP1-202ENST00000353411 MLLT11Q13015 90 aaPredicted RBP4.84□□□□□ -1.63
SKP1-202ENST00000353411 SLC25A52Q3SY17 297 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 ZNF362Q5T0B9 420 aaPredicted RBP4.84□□□□□ -1.63
SKP1-202ENST00000353411 LETMD1Q6P1Q0 360 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 NUDT18Q6ZVK8 323 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 UNC93AQ86WB7 457 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 SPATA2LQ8IUW3 424 aaPredicted RBP4.84□□□□□ -1.63
SKP1-202ENST00000353411 DEFB106AQ8N104 65 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 GHDCQ8N2G8 530 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 OR8D1Q8WZ84 308 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 ZNF566Q969W8 418 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 C7orf34Q96L11 122 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 PPP1R14DQ9NXH3 145 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 FER1L6Q2WGJ9 1857 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 A0A1W2PRB8 838 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 OR5K3A6NET4 321 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 B4DXG7 233 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 WNT9AO14904 365 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 TLX2O43763 284 aaPredicted RBP4.84□□□□□ -1.63
SKP1-202ENST00000353411 FKTNO75072 461 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 C1RP00736 705 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 HPGDP15428 266 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 AXLP30530 894 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 SLC1A2P43004 574 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 VLDLRP98155 873 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 LARS2Q15031 903 aaKnown RBP4.84□□□□□ -1.63
SKP1-202ENST00000353411 RNF151Q2KHN1 245 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 FRRS1Q6ZNA5 592 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 LAX1Q8IWV1 398 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 SP8Q8IXZ3 490 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 JOSD2Q8TAC2 188 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 CELF6Q96J87 481 aaKnown RBP4.84□□□□□ -1.63
SKP1-202ENST00000353411 LDAHQ9H6V9 325 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 TMEM134Q9H6X4 195 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 WDR26Q9H7D7 661 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 IPPKQ9H8X2 491 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 TRAV19A0A0A6YYK7 116 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 A0A0B4J203 849 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 IQCMA0A1B0GVH7 501 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 ARVCFO00192 962 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 TGOLN2O43493 480 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 H1F0P07305 194 aaKnown RBP4.84□□□□□ -1.63
SKP1-202ENST00000353411 MMP10P09238 476 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 RHCEP18577 417 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 HNF1AP20823 631 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 CD300CQ08708 224 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 GPR17Q13304 367 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 CPSF6Q16630 551 aaKnown RBP eCLIP4.84□□□□□ -1.63
SKP1-202ENST00000353411 TMEM81Q6P7N7 255 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 FIP1L1Q6UN15 594 aaKnown RBP4.84□□□□□ -1.63
SKP1-202ENST00000353411 SLC46A3Q7Z3Q1 461 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 HS3ST5Q8IZT8 346 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 CYP2W1Q8TAV3 490 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 NT5C3BQ969T7 300 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 MED8Q96G25 268 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 BCO1Q9HAY6 547 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 MRM3Q9HC36 420 aaKnown RBP4.84□□□□□ -1.63
SKP1-202ENST00000353411 GPRC5BQ9NZH0 403 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 SLC23A1Q9UHI7 598 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 A0A096LPI6 279 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.84□□□□□ -1.63
SKP1-202ENST00000353411 LCHNA4D1U4 455 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 OR2A25A4D2G3 310 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 FAM221BA6H8Z2 402 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 FAM170BA6NMN3 283 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 GPR25O00155 361 aa4.84□□□□□ -1.63
SKP1-202ENST00000353411 TACSTD2P09758 323 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms