RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 TMEM159Q96B96 161 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 TXNDC15Q96J42 360 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 LINC00615Q96LM1 132 aaPredicted RBP8.2□□□□□ -1.1
TRIM55-204ENST00000353317 FRG2BQ96QU4 278 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 OR4K3Q96R72 315 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 CTRCQ99895 268 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 SLX1AQ9BQ83 275 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 GABARAPL3Q9BY60 117 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 ZDHHC5Q9C0B5 715 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 OR52A5Q9H2C5 316 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 C6orf106Q9H6K1 298 aaPredicted RBP8.2□□□□□ -1.1
TRIM55-204ENST00000353317 PSORS1C1Q9UIG5 152 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 SH2B3Q9UQQ2 575 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 BTBD3Q9Y2F9 522 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 UGT2A1Q9Y4X1 527 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 CEP192Q8TEP8 1941 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 TAF4O00268 1085 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 SNPHO15079 494 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 CPSF4O95639 269 aaKnown RBP8.2□□□□□ -1.1
TRIM55-204ENST00000353317 DLGAP3O95886 979 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 SLC16A8O95907 504 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 GSTM1P09488 218 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 ITPKAP23677 461 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 RRM2P31350 389 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 CTSKP43235 329 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 PCYT1AP49585 367 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 HNRNPFP52597 415 aaKnown RBP8.2□□□□□ -1.1
TRIM55-204ENST00000353317 NKX2-5P52952 324 aaPredicted RBP8.2□□□□□ -1.1
TRIM55-204ENST00000353317 SGCGQ13326 291 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 TBCEQ15813 527 aaPredicted RBP8.2□□□□□ -1.1
TRIM55-204ENST00000353317 ERICH5Q6P6B1 374 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 MSANTD1Q6ZTZ1 278 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 LRRC70Q7Z2Q7 622 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 TSEN54Q7Z6J9 526 aaKnown RBP8.2□□□□□ -1.1
TRIM55-204ENST00000353317 SYT12Q8IV01 421 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 SYNPOQ8N3V7 929 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 PARP16Q8N5Y8 322 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 L3MBTL4Q8NA19 623 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 FCGR1BQ92637 280 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 GGHQ92820 318 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 PKP4Q99569 1192 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 EPYCQ99645 322 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 WDR26Q9H7D7 661 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 TPT1P8Q9HAU6 139 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 FGF22Q9HCT0 170 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 ITM2CQ9NQX7 267 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 GPR34Q9UPC5 381 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 CAB39Q9Y376 341 aaPredicted RBP8.2□□□□□ -1.1
TRIM55-204ENST00000353317 BDP1A6H8Y1 2624 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 LOC100506127A0A0U1RQW1 187 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 SAGE2PA6NJ88 616 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 CLCA1A8K7I4 914 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 NPIPB8E9PQR5 432 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 H3BM21 787 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 EIF3FO00303 357 aaPredicted RBP8.19□□□□□ -1.1
TRIM55-204ENST00000353317 VEGFDO43915 354 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 C1orf105O95561 183 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 C8GP07360 202 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 LAMP1P11279 417 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 COX7A2P14406 83 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 CD22P20273 847 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 IMPA1P29218 277 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 NUDT6P53370 316 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 CRISP3P54108 245 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 CSNK2BP67870 215 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 VEZF1Q14119 521 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 FBXO43Q4G163 708 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 SYTL3Q4VX76 610 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 EOGTQ5NDL2 527 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 DESI1Q6ICB0 168 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 TUBA3EQ6PEY2 450 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 ZNF852Q6ZMS4 543 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 USP30Q70CQ3 517 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 USP43Q70EL4 1123 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 SLC46A3Q7Z3Q1 461 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 TRMT11Q7Z4G4 463 aaKnown RBP8.19□□□□□ -1.1
TRIM55-204ENST00000353317 AKAP14Q86UN6 197 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 DNAJC22Q8N4W6 341 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 IL17FQ96PD4 163 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 FEVQ99581 238 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 APOOQ9BUR5 198 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 TPSD1Q9BZJ3 242 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 NXF2Q9GZY0 626 aaKnown RBP8.19□□□□□ -1.1
TRIM55-204ENST00000353317 OR51E2Q9H255 320 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 EHD1Q9H4M9 534 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 GPR83Q9NYM4 423 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 USP36Q9P275 1121 aaKnown RBP8.19□□□□□ -1.1
TRIM55-204ENST00000353317 FZD4Q9ULV1 537 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 PLAGL1Q9UM63 463 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 TESMINQ9Y4I5 508 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 MGAT4DA6NG13 374 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 KPNA5O15131 536 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 DPM1O60762 260 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 GCM2O75603 506 aaPredicted RBP8.19□□□□□ -1.1
TRIM55-204ENST00000353317 EML2O95834 649 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 IGHV4-34P06331 123 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 CDK1P06493 297 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 ACADMP11310 421 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 LIMK1P53667 647 aa8.19□□□□□ -1.1
TRIM55-204ENST00000353317 SRSF11Q05519 484 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 356.3 ms