RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 STX5Q13190 355 aa25.51■■□□□ 1.68
SSBP4-202ENST00000348495 COQ5Q5HYK3 327 aa25.51■■□□□ 1.68
SSBP4-202ENST00000348495 OR4F3Q6IEY1 312 aa25.51■■□□□ 1.68
SSBP4-202ENST00000348495 TMEM52Q8NDY8 209 aa25.51■■□□□ 1.68
SSBP4-202ENST00000348495 DNAJB14Q8TBM8 379 aa25.51■■□□□ 1.68
SSBP4-202ENST00000348495 PEX11GQ96HA9 241 aa25.51■■□□□ 1.68
SSBP4-202ENST00000348495 DUSP26Q9BV47 211 aa25.51■■□□□ 1.68
SSBP4-202ENST00000348495 ASPSCR1Q9BZE9 553 aa25.51■■□□□ 1.68
SSBP4-202ENST00000348495 RPF2Q9H7B2 306 aaKnown RBP25.51■■□□□ 1.68
SSBP4-202ENST00000348495 WDR41Q9HAD4 459 aa25.51■■□□□ 1.68
SSBP4-202ENST00000348495 ATAD3AQ9NVI7 634 aa25.51■■□□□ 1.68
SSBP4-202ENST00000348495 SATB2Q9UPW6 733 aa25.51■■□□□ 1.68
SSBP4-202ENST00000348495 NDUFAF1Q9Y375 327 aa25.51■■□□□ 1.68
SSBP4-202ENST00000348495 FAM149AA5PLN7 773 aa25.51■■□□□ 1.67
SSBP4-202ENST00000348495 ESRRAP11474 423 aaPredicted RBP25.51■■□□□ 1.67
SSBP4-202ENST00000348495 FBLP22087 321 aaKnown RBP25.51■■□□□ 1.67
SSBP4-202ENST00000348495 ABHD18Q0P651 414 aa25.51■■□□□ 1.67
SSBP4-202ENST00000348495 NKAIN1Q4KMZ8 207 aa25.51■■□□□ 1.67
SSBP4-202ENST00000348495 OR52E8Q6IFG1 317 aa25.51■■□□□ 1.67
SSBP4-202ENST00000348495 MSANTD1Q6ZTZ1 278 aa25.51■■□□□ 1.67
SSBP4-202ENST00000348495 COX15Q7KZN9 410 aa25.51■■□□□ 1.67
SSBP4-202ENST00000348495 RETREG3Q86VR2 466 aa25.51■■□□□ 1.67
SSBP4-202ENST00000348495 COL26A1Q96A83 441 aa25.51■■□□□ 1.67
SSBP4-202ENST00000348495 OR52E6Q96RD3 313 aa25.51■■□□□ 1.67
SSBP4-202ENST00000348495 PTPRBP23467 1997 aa25.5■■□□□ 1.67
SSBP4-202ENST00000348495 BBIP1A8MTZ0 92 aa25.5■■□□□ 1.67
SSBP4-202ENST00000348495 KIAA0754O94854 1291 aa25.5■■□□□ 1.67
SSBP4-202ENST00000348495 SPRED3Q2MJR0 410 aa25.5■■□□□ 1.67
SSBP4-202ENST00000348495 C3orf38Q5JPI3 329 aa25.5■■□□□ 1.67
SSBP4-202ENST00000348495 TMPRSS7Q7RTY8 843 aa25.5■■□□□ 1.67
SSBP4-202ENST00000348495 TBC1D20Q96BZ9 403 aa25.5■■□□□ 1.67
SSBP4-202ENST00000348495 ULBP3Q9BZM4 244 aa25.5■■□□□ 1.67
SSBP4-202ENST00000348495 FAM120CQ9NX05 1096 aaKnown RBP25.5■■□□□ 1.67
SSBP4-202ENST00000348495 UTS2RQ9UKP6 389 aa25.5■■□□□ 1.67
SSBP4-202ENST00000348495 ANGPT2O15123 496 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 XCR1P46094 333 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 CPA2P48052 419 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 ACTN3Q08043 901 aaPredicted RBP25.49■■□□□ 1.67
SSBP4-202ENST00000348495 ARHGAP40Q5TG30 622 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 CCDC121Q6ZUS5 278 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 GALNT15Q8N3T1 639 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 EXOSC8Q96B26 276 aaKnown RBP25.49■■□□□ 1.67
SSBP4-202ENST00000348495 RCN3Q96D15 328 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 OR1F2PQ96R84 312 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 SLC35C2Q9NQQ7 365 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 TRPC4Q9UBN4 977 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 C9orf172C9J069 976 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 MEN1O00255 615 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 UNC5CO95185 931 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 DDX5P17844 614 aaKnown RBP25.49■■□□□ 1.67
SSBP4-202ENST00000348495 IL10P22301 178 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 FRKP42685 505 aaPredicted RBP25.49■■□□□ 1.67
SSBP4-202ENST00000348495 DCDP81605 110 aaKnown RBP25.49■■□□□ 1.67
SSBP4-202ENST00000348495 PAGE3Q5JUK9 113 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 REP15Q6BDI9 236 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 MARCH9Q86YJ5 346 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 TANKQ92844 425 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 CIDECQ96AQ7 238 aaPredicted RBP25.49■■□□□ 1.67
SSBP4-202ENST00000348495 NPAS2Q99743 824 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 SPRY4Q9C004 299 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 SERHLQ9NQF3 203 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 MAP10Q9P2G4 905 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 LEF1Q9UJU2 399 aaPredicted RBP25.49■■□□□ 1.67
SSBP4-202ENST00000348495 PCDHGA8Q9Y5G5 932 aa25.49■■□□□ 1.67
SSBP4-202ENST00000348495 BLACEA4D250 179 aa25.48■■□□□ 1.67
SSBP4-202ENST00000348495 FHP07954 510 aa25.48■■□□□ 1.67
SSBP4-202ENST00000348495 PCBP4P57723 403 aaKnown RBP25.48■■□□□ 1.67
SSBP4-202ENST00000348495 CEBPEQ15744 281 aa25.48■■□□□ 1.67
SSBP4-202ENST00000348495 SLC2A7Q6PXP3 512 aa25.48■■□□□ 1.67
SSBP4-202ENST00000348495 YTHDF3Q7Z739 585 aaKnown RBP25.48■■□□□ 1.67
SSBP4-202ENST00000348495 DPP10Q8N608 796 aa25.48■■□□□ 1.67
SSBP4-202ENST00000348495 NATD1Q8N6N6 113 aa25.48■■□□□ 1.67
SSBP4-202ENST00000348495 CNRIP1Q96F85 164 aaPredicted RBP25.48■■□□□ 1.67
SSBP4-202ENST00000348495 RBCK1Q9BYM8 510 aa25.48■■□□□ 1.67
SSBP4-202ENST00000348495 B3GNT4Q9C0J1 378 aa25.48■■□□□ 1.67
SSBP4-202ENST00000348495 LANCL2Q9NS86 450 aa25.48■■□□□ 1.67
SSBP4-202ENST00000348495 CFAP54Q96N23 3096 aa25.47■■□□□ 1.67
SSBP4-202ENST00000348495 IGLV3-12A0A075B6K2 115 aa25.47■■□□□ 1.67
SSBP4-202ENST00000348495 PRSS51A0A1B0GVH4 220 aa25.47■■□□□ 1.67
SSBP4-202ENST00000348495 DCDC2BA2VCK2 349 aa25.47■■□□□ 1.67
SSBP4-202ENST00000348495 RNASET2O00584 256 aaKnown RBP25.47■■□□□ 1.67
SSBP4-202ENST00000348495 MNAT1P51948 309 aa25.47■■□□□ 1.67
SSBP4-202ENST00000348495 MAPKAPK3Q16644 382 aa25.47■■□□□ 1.67
SSBP4-202ENST00000348495 ANXA8L1Q5VT79 327 aa25.47■■□□□ 1.67
SSBP4-202ENST00000348495 FAM180BQ6P0A1 224 aa25.47■■□□□ 1.67
SSBP4-202ENST00000348495 ZNF517Q6ZMY9 492 aaPredicted RBP25.47■■□□□ 1.67
SSBP4-202ENST00000348495 ZNF595Q8IYB9 648 aa25.47■■□□□ 1.67
SSBP4-202ENST00000348495 FBXO27Q8NI29 283 aa25.47■■□□□ 1.67
SSBP4-202ENST00000348495 GTF2H4Q92759 462 aa25.47■■□□□ 1.67
SSBP4-202ENST00000348495 KLHL29Q96CT2 875 aa25.47■■□□□ 1.67
SSBP4-202ENST00000348495 ZNF681Q96N22 645 aa25.47■■□□□ 1.67
SSBP4-202ENST00000348495 DPH2Q9BQC3 489 aaPredicted RBP25.47■■□□□ 1.67
SSBP4-202ENST00000348495 EFCAB1Q9HAE3 211 aa25.47■■□□□ 1.67
SSBP4-202ENST00000348495 MKKSQ9NPJ1 570 aaPredicted RBP25.47■■□□□ 1.67
SSBP4-202ENST00000348495 SLAMF7Q9NQ25 335 aa25.47■■□□□ 1.67
SSBP4-202ENST00000348495 PSME2Q9UL46 239 aa25.47■■□□□ 1.67
SSBP4-202ENST00000348495 MAN2B2Q9Y2E5 1009 aa25.47■■□□□ 1.67
SSBP4-202ENST00000348495 BMP10O95393 424 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 MMEL1Q495T6 779 aa25.46■■□□□ 1.67
SSBP4-202ENST00000348495 LACTB2Q53H82 288 aaPredicted RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms