RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 TIGD2Q4W5G0 525 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 VWA2Q5GFL6 755 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 OR4F3Q6IEY1 312 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 FAM199XQ6PEV8 388 aaPredicted RBP17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 ZC3H7AQ8IWR0 971 aaKnown RBP17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 OR4N5Q8IXE1 308 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 GLB1L3Q8NCI6 653 aaPredicted RBP17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 DNAJB14Q8TBM8 379 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 CIDECQ96AQ7 238 aaPredicted RBP17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 EXOSC8Q96B26 276 aaKnown RBP17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 PPCDCQ96CD2 204 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 SPDL1Q96EA4 605 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 FAIM2Q9BWQ8 316 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 RPF2Q9H7B2 306 aaKnown RBP17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 LANCL2Q9NS86 450 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 SH3BP4Q9P0V3 963 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 TRPC4Q9UBN4 977 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 MAP4K5Q9Y4K4 846 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 PCDHGA8Q9Y5G5 932 aa17.9■□□□□ 0.46
CHMP4A-201ENST00000347519 MYOCOSA0A1B0GUC4 107 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 C1orf226A1L170 272 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 TGFBR3LH3BV60 316 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 FBP2O00757 339 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 TBX19O60806 448 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 B4GALT2O60909 372 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 SCN2BO60939 215 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 CDC123O75794 336 aaPredicted RBP17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 SNRPB2P08579 225 aaKnown RBP17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 BUD31P41223 144 aaPredicted RBP17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 CPA2P48052 419 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 BTG2P78543 158 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 ID2Q02363 134 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 ABHD18Q0P651 414 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 TLR1Q15399 786 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 CPTPQ5TA50 214 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 SLC48A1Q6P1K1 146 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 CAMKMTQ7Z624 323 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 RETREG3Q86VR2 466 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 TBC1D20Q96BZ9 403 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 MTERF3Q96E29 417 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 LRFN5Q96NI6 719 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 ZPBPQ9BS86 351 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 ASPSCR1Q9BZE9 553 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 CHST8Q9H2A9 424 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 POLR1BQ9H9Y6 1135 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 SLAMF7Q9NQ25 335 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 MIEF1Q9NQG6 463 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 TMEM45AQ9NWC5 275 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 MS4A12Q9NXJ0 267 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 SPTBN2O15020 2390 aa17.89■□□□□ 0.45
CHMP4A-201ENST00000347519 FGF17O60258 216 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 LDB3O75112 727 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 BMP10O95393 424 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 PGRP06401 933 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 FHP07954 510 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 PCSK2P16519 638 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 S100A3P33764 101 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 KCNK10P57789 538 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 CAMK2BQ13554 666 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 SPRED3Q2MJR0 410 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 PAGE3Q5JUK9 113 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 OR52E8Q6IFG1 317 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 R3HCC1LQ7Z5L2 792 aaKnown RBP17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 ANKRD9Q96BM1 317 aaPredicted RBP17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 CNRIP1Q96F85 164 aaPredicted RBP17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 DUSP26Q9BV47 211 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 MRGBPQ9NV56 204 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 EHD3Q9NZN3 535 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 UTS2RQ9UKP6 389 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 ERVK-11Q9UQG0 969 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 CLDN16Q9Y5I7 305 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 SPACA6W5XKT8 324 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 WDFY3Q8IZQ1 3526 aa17.88■□□□□ 0.45
CHMP4A-201ENST00000347519 CCDC154A6NI56 674 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 ERAL1O75616 437 aaKnown RBP17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 C8orf89P0DMQ9 161 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 PRDX6P30041 224 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 TLX1P31314 330 aaPredicted RBP17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 PTGER1P34995 402 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 KIR3DL1P43629 444 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 PLIN5Q00G26 463 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 SRSF11Q05519 484 aaKnown RBP17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 ACTN3Q08043 901 aaPredicted RBP17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 CYLC2Q14093 348 aaPredicted RBP17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 SLC2A7Q6PXP3 512 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 FAM198BQ6UWH4 519 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 OVCH1Q7RTY7 1134 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 LAPTM4BQ86VI4 370 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 ANKRD46Q86W74 232 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 PRSS58Q8IYP2 241 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 CLECL1Q8IZS7 167 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 OR8J2Q8NGG1 315 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 RP9Q8TA86 221 aaKnown RBP17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 MR1Q95460 341 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 KLHL29Q96CT2 875 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 ZNF681Q96N22 645 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 SLC46A1Q96NT5 459 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 NPAS2Q99743 824 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 WDR41Q9HAD4 459 aa17.87■□□□□ 0.45
CHMP4A-201ENST00000347519 TAS2R7Q9NYW3 318 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms