RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 ALOX15BO15296 676 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 USP49Q70CQ1 688 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 ASB3Q9Y575 518 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 CD44P16070 742 aaKnown RBP17.01■□□□□ 0.31
SMAD4-201ENST00000342988 NDST2P52849 883 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 NTRK3Q16288 839 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 ANKS1BQ7Z6G8 1248 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 SIRT2Q8IXJ6 389 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 NUS1Q96E22 293 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 UHRF2Q96PU4 802 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 EBF3Q9H4W6 596 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 CACNA1SQ13698 1873 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 K7EPI3 171 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 CDH15P55291 814 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 UBE2NP61088 152 aaKnown RBP17.01■□□□□ 0.31
SMAD4-201ENST00000342988 TMEM31Q5JXX7 168 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 RTL6Q6ICC9 239 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 FAM109AQ8N4B1 249 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 LRRC52Q8N7C0 313 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 OR4D6Q8NGJ1 314 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 OR6K2Q8NGY2 324 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 SDSLQ96GA7 329 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 LUZP4Q9P127 313 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 NPC1O15118 1278 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 ABCB7O75027 752 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 ZNF780AO75290 641 aaPredicted RBP17.01■□□□□ 0.31
SMAD4-201ENST00000342988 BCHEP06276 602 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 F2RP25116 425 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 CDONQ4KMG0 1287 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 BRICD5Q6PL45 260 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 FAM46BQ96A09 425 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 FAM84AQ96KN4 292 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 RNF208Q9H0X6 261 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 OR2AG1Q9H205 316 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 FANCGO15287 622 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 INPPL1O15357 1258 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 RDH16O75452 317 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 KCNJ11Q14654 390 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 DUOXA1Q1HG43 343 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 UGT3A2Q3SY77 523 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 C10orf62Q5T681 223 aaPredicted RBP17.01■□□□□ 0.31
SMAD4-201ENST00000342988 PDE12Q6L8Q7 609 aaKnown RBP17.01■□□□□ 0.31
SMAD4-201ENST00000342988 COX15Q7KZN9 410 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 EXTL2Q9UBQ6 330 aa17.01■□□□□ 0.31
SMAD4-201ENST00000342988 ZNF423Q2M1K9 1284 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 SERPINA9Q86WD7 417 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 OR6Q1Q8NGQ2 317 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 DCUN1D4Q92564 292 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 RBCK1Q9BYM8 510 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 MTCL1Q9Y4B5 1905 aaKnown RBP17■□□□□ 0.31
SMAD4-201ENST00000342988 OR6C65A6NJZ3 312 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 CIDEAO60543 219 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 RARRES1P49788 294 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 CAV2P51636 162 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 GUK1Q16774 197 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 OAZ3Q9UMX2 235 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 ADRB3P13945 408 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 PAN3Q58A45 887 aaKnown RBP17■□□□□ 0.31
SMAD4-201ENST00000342988 AWAT2Q6E213 333 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 CMC1Q7Z7K0 106 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 GKN2Q86XP6 184 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 PAPD5Q8NDF8 572 aaKnown RBP17■□□□□ 0.31
SMAD4-201ENST00000342988 P2RY11Q96G91 374 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 MGAT4BQ9UQ53 548 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 ZFC3H1O60293 1989 aaKnown RBP17■□□□□ 0.31
SMAD4-201ENST00000342988 PDHXO00330 501 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 CXCL11O14625 94 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 STBD1O95210 358 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 IDH3AP50213 366 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 HNRNPABQ99729 332 aaKnown RBP17■□□□□ 0.31
SMAD4-201ENST00000342988 LDHAL6BQ9BYZ2 381 aaPredicted RBP17■□□□□ 0.31
SMAD4-201ENST00000342988 TMEM94Q12767 1356 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 CRTAPO75718 401 aaPredicted RBP17■□□□□ 0.31
SMAD4-201ENST00000342988 METTL11BQ5VVY1 283 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 ZNF641Q96N77 438 aaPredicted RBP17■□□□□ 0.31
SMAD4-201ENST00000342988 CCM2Q9BSQ5 444 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 SLC25A51Q9H1U9 297 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 EI24O14681 340 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 MAP2K3P46734 347 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 PDLIM3Q53GG5 364 aaPredicted RBP17■□□□□ 0.31
SMAD4-201ENST00000342988 RDH12Q96NR8 316 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 GOSR2O14653 212 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 RHBDL3P58872 404 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 SCAPQ12770 1279 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 GBX1Q14549 363 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 RFTN1Q14699 578 aaPredicted RBP17■□□□□ 0.31
SMAD4-201ENST00000342988 ELP2Q6IA86 826 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 PRSS58Q8IYP2 241 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 TSEN2Q8NCE0 465 aaKnown RBP17■□□□□ 0.31
SMAD4-201ENST00000342988 SGCZQ96LD1 299 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 POLDIP3Q9BY77 421 aaKnown RBP17■□□□□ 0.31
SMAD4-201ENST00000342988 ACTR10Q9NZ32 417 aa17■□□□□ 0.31
SMAD4-201ENST00000342988 GPR137BO60478 399 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 DIRAS1O95057 198 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 YBEYP58557 167 aaPredicted RBP16.99■□□□□ 0.31
SMAD4-201ENST00000342988 VITQ6UXI7 678 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 CLEC10AQ8IUN9 316 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 ISCA1Q9BUE6 129 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 HDHD5Q9BXW7 423 aa16.99■□□□□ 0.31
SMAD4-201ENST00000342988 SSU72Q9NP77 194 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms