RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 ENTHD1Q8IYW4 607 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 ITPKCQ96DU7 683 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 ZSCAN5AQ9BUG6 496 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 LINC00597Q9H2U6 94 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 STOX2Q9P2F5 926 aaPredicted RBP11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 ANKMY1Q9P2S6 941 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 ZFR2Q9UPR6 939 aaKnown RBP11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 ABCA3Q99758 1704 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 TBC1D3DA0A087WVF3 549 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 TBC1D3IA0A087WXS9 549 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 TBC1D3EA0A087X179 549 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 TBC1D3KA0A087X1G2 549 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 TBC1D3FA6NER0 549 aaPredicted RBP11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 TBC1D3LB9A6J9 549 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 CAPN5O15484 640 aaPredicted RBP11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 SOCS5O75159 536 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 IGLV3-25P01717 112 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 TBC1D3HP0C7X1 549 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 ZNF8P17098 575 aaPredicted RBP11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 RPL6Q02878 288 aaKnown RBP11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 KEAP1Q14145 624 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 ZNF791Q3KP31 576 aaPredicted RBP11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 TBC1D3GQ6DHY5 549 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 TBC1D3CQ6IPX1 549 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 B3GLCTQ6Y288 498 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 TBC1D3Q8IZP1 549 aaPredicted RBP11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 WDR48Q8TAF3 677 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 GLYATL1Q969I3 302 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 IGSF21Q96ID5 467 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 EIF3KQ9UBQ5 218 aaKnown RBP11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 SEC14L4Q9UDX3 406 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 PPT2Q9UMR5 302 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 UTRNP46939 3433 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 I3L521 148 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 OR10H2O60403 315 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 GABARAPO95166 117 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 NT5EP21589 574 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 AOAHP28039 575 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 VIPR1P32241 457 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 GGT2P36268 569 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 CTBSQ01459 385 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 GNA13Q14344 377 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 SLC14A2Q15849 920 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 COX20Q5RI15 118 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 BICRALQ6AI39 1079 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 OR5D16Q8NGK9 328 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 TM9SF2Q99805 663 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 RNF186Q9NXI6 227 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 P2RX2Q9UBL9 471 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 MAN2B2Q9Y2E5 1009 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 UGT2A1Q9Y4X1 527 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 A0A1W2PQ09 198 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 A0A1W2PQ45 241 aaPredicted RBP11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 A0A1W2PQY0 241 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 LRRC72A6NJI9 287 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 C1GALT1C1LP0DN25 315 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 IHHQ14623 411 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 MICAQ29983 383 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 PLEKHS1Q5SXH7 462 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 CBLL1Q75N03 491 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 GALNT7Q86SF2 657 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 MEIOBQ8N635 442 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 TRPV1Q8NER1 839 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 NEIL3Q8TAT5 605 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 C17orf50Q8WW18 174 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 DNAJA3Q96EY1 480 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 PCNTO95613 3336 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 FAM86C2PA6NEL3 165 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 J3QLW9 94 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 SMAD9O15198 467 aaKnown RBP11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 NUAK1O60285 661 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 CDK1P06493 297 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 ZNF19P17023 458 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 TLX1P31314 330 aaPredicted RBP11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 SMSP52788 366 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 PNCKQ6P2M8 343 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 MTFR2Q6P444 385 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 NUDT13Q86X67 352 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 OR9A1PQ8NGU1 263 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 GRHL3Q8TE85 626 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 SECISBP2Q96T21 854 aaKnown RBP11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 TNFRSF10DQ9UBN6 386 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 LHX3Q9UBR4 397 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 SPEF1Q9Y4P9 236 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 DLGAP1O14490 977 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 PRMT3O60678 531 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 FKTNO75072 461 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 JRKO75564 520 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 ADORA3P0DMS8 318 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 SLC35A2P78381 396 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 SLC14A1Q13336 389 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 SLC9A5Q14940 896 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 TEAD2Q15562 447 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 NDUFAF6Q330K2 333 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 OR2G6Q5TZ20 316 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 BRAT1Q6PJG6 821 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 ZNF367Q7RTV3 350 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 SERPINA11Q86U17 422 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms