RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 PCSK5Q92824 1860 aa9.72□□□□□ -0.85
TPM3-207ENST00000341372 IGLV3-12A0A075B6K2 115 aa9.72□□□□□ -0.85
TPM3-207ENST00000341372 NCF1BA6NI72 391 aaPredicted RBP9.72□□□□□ -0.85
TPM3-207ENST00000341372 NCF1CA8MVU1 366 aaPredicted RBP9.72□□□□□ -0.85
TPM3-207ENST00000341372 POC1B-GALNT4F8VUJ3 575 aa9.72□□□□□ -0.85
TPM3-207ENST00000341372 KLK8O60259 260 aa9.72□□□□□ -0.85
TPM3-207ENST00000341372 LCMT2O60294 686 aaKnown RBP9.72□□□□□ -0.85
TPM3-207ENST00000341372 WDR47O94967 919 aa9.72□□□□□ -0.85
TPM3-207ENST00000341372 EIF2S1P05198 315 aaKnown RBP9.72□□□□□ -0.85
TPM3-207ENST00000341372 PRKAR1AP10644 381 aa9.72□□□□□ -0.85
TPM3-207ENST00000341372 PIM1P11309 404 aaPredicted RBP9.72□□□□□ -0.85
TPM3-207ENST00000341372 NCF1P14598 390 aaPredicted RBP9.72□□□□□ -0.85
TPM3-207ENST00000341372 CDC16Q13042 620 aa9.72□□□□□ -0.85
TPM3-207ENST00000341372 FAM53BQ14153 422 aa9.72□□□□□ -0.85
TPM3-207ENST00000341372 CEP85LQ5SZL2 805 aa9.72□□□□□ -0.85
TPM3-207ENST00000341372 BORAQ6PGQ7 559 aa9.72□□□□□ -0.85
TPM3-207ENST00000341372 TIFABQ6ZNK6 161 aa9.72□□□□□ -0.85
TPM3-207ENST00000341372 C8orf86Q6ZUL3 223 aa9.72□□□□□ -0.85
TPM3-207ENST00000341372 OR2Y1Q8NGV0 311 aa9.72□□□□□ -0.85
TPM3-207ENST00000341372 THAP4Q8WY91 577 aa9.72□□□□□ -0.85
TPM3-207ENST00000341372 EXTL1Q92935 676 aa9.72□□□□□ -0.85
TPM3-207ENST00000341372 WDR54Q9H977 334 aa9.72□□□□□ -0.85
TPM3-207ENST00000341372 CNOT10Q9H9A5 744 aaKnown RBP9.72□□□□□ -0.85
TPM3-207ENST00000341372 ADAM21Q9UKJ8 722 aa9.72□□□□□ -0.85
TPM3-207ENST00000341372 TMCC3Q9ULS5 477 aa9.72□□□□□ -0.85
TPM3-207ENST00000341372 SPTA1P02549 2419 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 FEZF1A0PJY2 475 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 VSTM2BA6NLU5 285 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 SYCE1LA8MT33 242 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 TRIM49D1C9J1S8 452 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 FOXS1O43638 330 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 STK16O75716 305 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 HSPA4LO95757 839 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 CELA3BP08861 270 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 SNRPAP09012 282 aaKnown RBP9.71□□□□□ -0.86
TPM3-207ENST00000341372 ALOX12P18054 663 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 GNAZP19086 355 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 ALAS2P22557 587 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 FPR2P25090 351 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 AHRP35869 848 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 GDF5P43026 501 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 LAPTM5Q13571 262 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 TECRLQ5HYJ1 363 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 SLCO4C1Q6ZQN7 724 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 LRRC70Q7Z2Q7 622 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 TMPRSS11BQ86T26 416 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 ASPGQ86U10 573 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 DTWD1Q8N5C7 304 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 CAMKVQ8NCB2 501 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.71□□□□□ -0.86
TPM3-207ENST00000341372 MTBPQ96DY7 904 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 WDR34Q96EX3 536 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 CABS1Q96KC9 395 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 TSNARE1Q96NA8 513 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 CAPS2Q9BXY5 557 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 EHD1Q9H4M9 534 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 DNAJC11Q9NVH1 559 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 CD274Q9NZQ7 290 aa9.71□□□□□ -0.86
TPM3-207ENST00000341372 NXT1Q9UKK6 140 aaKnown RBP9.71□□□□□ -0.86
TPM3-207ENST00000341372 RALYQ9UKM9 306 aaKnown RBP9.71□□□□□ -0.86
TPM3-207ENST00000341372 SMG1Q96Q15 3661 aaKnown RBP9.71□□□□□ -0.86
TPM3-207ENST00000341372 MED13Q9UHV7 2174 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 CDC14CA4D256 554 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 UBXN8O00124 270 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 SLC16A6O15403 523 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 PRPF4O43172 522 aaKnown RBP eCLIP9.7□□□□□ -0.86
TPM3-207ENST00000341372 APOL3O95236 402 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 WISP1O95388 367 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 EPORP19235 508 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 RPL11P62913 178 aaKnown RBP9.7□□□□□ -0.86
TPM3-207ENST00000341372 SNRPNP63162 240 aaKnown RBP9.7□□□□□ -0.86
TPM3-207ENST00000341372 PRR20EP86478 221 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 PRR20CP86479 221 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 PRR20DP86480 221 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 PRR20BP86481 221 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 PRR20AP86496 221 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 MEF2AQ02078 507 aaPredicted RBP9.7□□□□□ -0.86
TPM3-207ENST00000341372 NDUFA9Q16795 377 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 TNFAIP8L3Q5GJ75 292 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 LGSNQ5TDP6 509 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 ATG9BQ674R7 924 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 KLC3Q6P597 504 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 APLFQ8IW19 511 aaPredicted RBP9.7□□□□□ -0.86
TPM3-207ENST00000341372 ZNF740Q8NDX6 193 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 NT5CQ8TCD5 201 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 MZB1Q8WU39 189 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 ST8SIA4Q92187 359 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 RAB24Q969Q5 203 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 NACC2Q96BF6 587 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 AIF1LQ9BQI0 150 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 TMEM109Q9BVC6 243 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 PITHD1Q9GZP4 211 aaPredicted RBP9.7□□□□□ -0.86
TPM3-207ENST00000341372 DRC3Q9H069 523 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 ADNPQ9H2P0 1102 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 NT5DC2Q9H857 520 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 ZNF304Q9HCX3 659 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 ZFP69BQ9UJL9 534 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 CDC14AQ9UNH5 594 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 MRPS2Q9Y399 296 aaKnown RBP9.7□□□□□ -0.86
TPM3-207ENST00000341372 ASB1Q9Y576 335 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms