RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 DPH2Q9BQC3 489 aaPredicted RBP13.72□□□□□ -0.21
NIPAL3-202ENST00000339255 DDA1Q9BW61 102 aa13.72□□□□□ -0.21
NIPAL3-202ENST00000339255 LRMDAQ9H2I8 198 aa13.72□□□□□ -0.21
NIPAL3-202ENST00000339255 ZNF304Q9HCX3 659 aa13.72□□□□□ -0.21
NIPAL3-202ENST00000339255 SLC35C2Q9NQQ7 365 aa13.72□□□□□ -0.21
NIPAL3-202ENST00000339255 SLC39A1Q9NY26 324 aa13.72□□□□□ -0.21
NIPAL3-202ENST00000339255 DHCR7Q9UBM7 475 aaKnown RBP13.72□□□□□ -0.21
NIPAL3-202ENST00000339255 MAN2B2Q9Y2E5 1009 aa13.72□□□□□ -0.21
NIPAL3-202ENST00000339255 PTPRBP23467 1997 aa13.72□□□□□ -0.21
NIPAL3-202ENST00000339255 PIEZO1Q92508 2521 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 DMXL1Q9Y485 3027 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 ASPDHA6ND91 283 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 CLDN4O14493 209 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 PDPK1O15530 556 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 JMJD7P0C870 316 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 CD1EP15812 388 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 PTPN4P29074 926 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 NTSP30990 170 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 CPA2P48052 419 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 TRPC1P48995 793 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 OLR1P78380 273 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 DNAL1Q4LDG9 190 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 C16orf89Q6UX73 402 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 RETREG3Q86VR2 466 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 TMPRSS12Q86WS5 348 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 ZNF595Q8IYB9 648 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 MMP21Q8N119 569 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 OR51Q1Q8NH59 317 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 WDR36Q8NI36 951 aaKnown RBP13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 TBC1D20Q96BZ9 403 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 KLHL29Q96CT2 875 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 LRFN5Q96NI6 719 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 CCDC115Q96NT0 180 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 NEUROD4Q9HD90 331 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 ACSS1Q9NUB1 689 aaPredicted RBP13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 HCN3Q9P1Z3 774 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 BTNL2Q9UIR0 455 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 UTS2RQ9UKP6 389 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 ENTPD4Q9Y227 616 aa13.71□□□□□ -0.21
NIPAL3-202ENST00000339255 ERN1O75460 977 aaKnown RBP13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 KCNH1O95259 989 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 CCL4P13236 92 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 FRKP42685 505 aaPredicted RBP13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 NCALDP61601 193 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 NFYCQ13952 458 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 ZNF385BQ569K4 471 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 C6orf10Q5SRN2 563 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 PRAMEF17Q5VTA0 474 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 ANKRD26P1Q6NSI1 321 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 RBM15BQ8NDT2 890 aaKnown RBP13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 C7orf57Q8NEG2 295 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 ZFP28Q8NHY6 868 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 DNAJB14Q8TBM8 379 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 GTF2H4Q92759 462 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 COL26A1Q96A83 441 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 EXOSC8Q96B26 276 aaKnown RBP13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 GBP5Q96PP8 586 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 TAAR9Q96RI9 348 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 NPAS2Q99743 824 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 BTBD10Q9BSF8 475 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 B3GNT4Q9C0J1 378 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 APMAPQ9HDC9 416 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 MKKSQ9NPJ1 570 aaPredicted RBP13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 CES1P1Q9UKY3 287 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 PCDHGB4Q9UN71 923 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 ZNF780BQ9Y6R6 833 aa13.7□□□□□ -0.22
NIPAL3-202ENST00000339255 A0A096LPI6 279 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 C15orf38-AP3S2A0A0A6YYH1 394 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 SYNDIG1LA6NDD5 238 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 GLOD5A6NK44 160 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 RFXANKO14593 260 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 PGRMC2O15173 223 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 GYG2O15488 501 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 SCN2BO60939 215 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 TIAF1O95411 115 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 ONECUT2O95948 504 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 FHP07954 510 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 MPIP34949 423 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 CPOXP36551 454 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 XCR1P46094 333 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 WNT3P56703 355 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 PHC1P78364 1004 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 MLC1Q15049 377 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 CEBPEQ15744 281 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 SPRED3Q2MJR0 410 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 ARHGAP40Q5TG30 622 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 TMEM164Q5U3C3 297 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 SLC2A7Q6PXP3 512 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 ARPINQ7Z6K5 226 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 DHDDSQ86SQ9 333 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 GALNT15Q8N3T1 639 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 DTWD1Q8N5C7 304 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 METTL27Q8N6F8 245 aaPredicted RBP13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 NUDT8Q8WV74 236 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 SLC7A6OSQ96CW6 309 aaPredicted RBP13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 PANX1Q96RD7 426 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 BBS4Q96RK4 519 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 CSF3RQ99062 836 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 ULBP3Q9BZM4 244 aa13.69□□□□□ -0.22
NIPAL3-202ENST00000339255 SERHLQ9NQF3 203 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms