RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 MYBPC1Q00872 1141 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 DUSP2Q05923 314 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 FADDQ13158 208 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 ZDHHC13Q8IUH4 622 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 ZCCHC7Q8N3Z6 543 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 CYGBQ8WWM9 190 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 TM4SF19Q96DZ7 209 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 AMDHD1Q96NU7 426 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 ADI1Q9BV57 179 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 VNN3Q9NY84 501 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 PRKACGP22612 351 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 FEN1P39748 380 aaKnown RBP21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 CSNK1EP49674 416 aaKnown RBP21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 NCBP2P52298 156 aaKnown RBP eCLIP21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 MERTKQ12866 999 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 TP53BP2Q13625 1128 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 CYBRD1Q53TN4 286 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 CEACAM20Q6UY09 585 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 SHISA5Q8N114 240 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 HORMAD2Q8N7B1 307 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 GAL3ST3Q96A11 431 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 CLDN23Q96B33 292 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 CNRIP1Q96F85 164 aaPredicted RBP21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 BBS4Q96RK4 519 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 ZFYVE21Q9BQ24 234 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 SMURF2Q9HAU4 748 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 NEUROD4Q9HD90 331 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 IL1RAPQ9NPH3 570 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 TAS2R7Q9NYW3 318 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 DOLKQ9UPQ8 538 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 ENTPD2Q9Y5L3 495 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 SPAG17Q6Q759 2223 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 OR5K3A6NET4 321 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 TMEM229AB2RXF0 380 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 E2F6O75461 281 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 SMNDC1O75940 238 aaKnown RBP eCLIP21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 GPC1P35052 558 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 ARSFP54793 590 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 CDK6Q00534 326 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 TEAD4Q15561 434 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 ZIK1Q3SY52 487 aaPredicted RBP21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 SAXO2Q658L1 398 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 C6orf120Q7Z4R8 191 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 CARM1Q86X55 608 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 DCP2Q8IU60 420 aaKnown RBP21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 SLC44A2Q8IWA5 706 aaPredicted RBP21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 CCDC116Q8IYX3 515 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 GJD3Q8N144 294 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 BAHD1Q8TBE0 780 aaPredicted RBP21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 FAM174AQ8TBP5 190 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 NT5CQ8TCD5 201 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 RAB8BQ92930 207 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 ASPSCR1Q9BZE9 553 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 TMEM74BQ9NUR3 256 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 SMPD3Q9NY59 655 aaPredicted RBP21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 MRPS2Q9Y399 296 aaKnown RBP21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 SIT1Q9Y3P8 196 aa21.23■□□□□ 0.99
PDLIM2-203ENST00000339162 H0YGG7 62 aa21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 PROM1O43490 865 aa21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 HCRTR1O43613 425 aa21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 NOBOXO60393 691 aa21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 TNFRSF1BP20333 461 aa21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 MAGEA2P43356 314 aa21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 CXCL12P48061 93 aa21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 CCT3P49368 545 aaKnown RBP21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 ARF3P61204 181 aaPredicted RBP21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 OLR1P78380 273 aa21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 LAPTM4AQ15012 233 aa21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 ELOCQ15369 112 aa21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 CYP27C1Q4G0S4 372 aa21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 OOSP2Q86WS3 158 aa21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 CAMKK1Q8N5S9 505 aa21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 NATD1Q8N6N6 113 aa21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 NEURL3Q96EH8 262 aa21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 FBXL20Q96IG2 436 aa21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 STARD5Q9NSY2 213 aa21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 EHD3Q9NZN3 535 aa21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 ANKMY1Q9P2S6 941 aa21.22■□□□□ 0.99
PDLIM2-203ENST00000339162 A0A0J9YY10 115 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 ZNF860A6NHJ4 632 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 SUV39H1O43463 412 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 DSTNP60981 165 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 TXNL4AP83876 142 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 EEF1A2Q05639 463 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 TGM3Q08188 693 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 ZNF764Q96H86 408 aaPredicted RBP21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 TMEM38AQ9H6F2 299 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 ACSS1Q9NUB1 689 aaPredicted RBP21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 SPEGQ15772 3267 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 A0A1B0GTW7 788 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 FAM221BA6H8Z2 402 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 M0QX08 132 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 SEMG1P04279 462 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 FABP3P05413 133 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 DDX5P17844 614 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 DEFB133Q30KQ1 61 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 TSSK4Q6SA08 328 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 PRSS41Q7RTY9 318 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 ARL14Q8N4G2 192 aa21.21■□□□□ 0.99
PDLIM2-203ENST00000339162 OTUB1Q96FW1 271 aaPredicted RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms