RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 PCDHGB3Q9Y5G1 929 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.61□□□□□ -0.71
CSMD2-202ENST00000338325 FREM3P0C091 2139 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 A0A1B0GTL3 188 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 ANKDD1BA6NHY2 528 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 CDC7O00311 574 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 DVL2O14641 736 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 RAF1P04049 648 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 ZNF37AP17032 561 aaPredicted RBP10.6□□□□□ -0.71
CSMD2-202ENST00000338325 TNNI3P19429 210 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 PIGAP37287 484 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 LTBQ06643 244 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 SERTAD2Q14140 314 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 CYP1B1Q16678 543 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 MPEG1Q2M385 716 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 TEDDM1Q5T9Z0 273 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 RNASEH2BQ5TBB1 312 aaKnown RBP10.6□□□□□ -0.71
CSMD2-202ENST00000338325 ABHD17CQ6PCB6 329 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 ULK2Q8IYT8 1036 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 RASGEF1CQ8N431 466 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 ANKRD7Q92527 254 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 RNASE6Q93091 150 aaKnown RBP10.6□□□□□ -0.71
CSMD2-202ENST00000338325 KIAA1191Q96A73 305 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 NAT9Q9BTE0 207 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 PITHD1Q9GZP4 211 aaPredicted RBP10.6□□□□□ -0.71
CSMD2-202ENST00000338325 NT5DC2Q9H857 520 aa10.6□□□□□ -0.71
CSMD2-202ENST00000338325 PPANQ9NQ55 473 aaKnown RBP10.6□□□□□ -0.71
CSMD2-202ENST00000338325 BOKQ9UMX3 212 aaPredicted RBP10.6□□□□□ -0.71
CSMD2-202ENST00000338325 GOLGA6L6A8MZA4 724 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 LDB3O75112 727 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 ATE1O95260 518 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 TBX6O95947 436 aaPredicted RBP10.59□□□□□ -0.71
CSMD2-202ENST00000338325 BMP5P22003 454 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 TACR1P25103 407 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 GDF5P43026 501 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 SLC6A12P48065 614 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 KCNJ2P63252 427 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 TGM3Q08188 693 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 TBL3Q12788 808 aaKnown RBP10.59□□□□□ -0.71
CSMD2-202ENST00000338325 ASPHQ12797 758 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 DAZAP2Q15038 168 aaPredicted RBP10.59□□□□□ -0.71
CSMD2-202ENST00000338325 DEFB113Q30KQ7 82 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 C18orf21Q32NC0 220 aaPredicted RBP10.59□□□□□ -0.71
CSMD2-202ENST00000338325 FBXL19-AS1Q494R0 122 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 PIGGQ5H8A4 983 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 FBXW10Q5XX13 1052 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 SLC22A10Q63ZE4 541 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 ADGRD1Q6QNK2 874 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 SEM1Q6ZVN7 128 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 FRA10AC1Q70Z53 315 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 VN1R5Q7Z5H4 357 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 NKAPQ8N5F7 415 aaKnown RBP10.59□□□□□ -0.71
CSMD2-202ENST00000338325 NEIL3Q8TAT5 605 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 SLC22A8Q8TCC7 542 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 ZNF721Q8TF20 911 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 GRK7Q8WTQ7 553 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 RUNDC3BQ96NL0 473 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 SH2D2AQ9NP31 389 aa10.59□□□□□ -0.71
CSMD2-202ENST00000338325 MTRF1LQ9UGC7 380 aaKnown RBP10.59□□□□□ -0.71
CSMD2-202ENST00000338325 FOXD3Q9UJU5 478 aaPredicted RBP10.59□□□□□ -0.71
CSMD2-202ENST00000338325 ETHE1O95571 254 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 RFPL3SP0C7P2 107 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 KEAP1Q14145 624 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 ZNF791Q3KP31 576 aaPredicted RBP10.58□□□□□ -0.72
CSMD2-202ENST00000338325 MSS51Q4VC12 460 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 ADAMTSL2Q86TH1 951 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 IGDCC3Q8IVU1 814 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 LRRC25Q8N386 305 aaPredicted RBP10.58□□□□□ -0.72
CSMD2-202ENST00000338325 LIX1Q8N485 282 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 NAXEQ8NCW5 288 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 WFDC11Q8NEX6 87 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 TNIP2Q8NFZ5 429 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 NUBPLQ8TB37 319 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 PAQR8Q8TEZ7 354 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 RHBDF1Q96CC6 855 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 MS4A14Q96JA4 679 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 CAPZA3Q96KX2 299 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 CAPS2Q9BXY5 557 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 SLC6A15Q9H2J7 730 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 PLAC1Q9HBJ0 212 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 LYRM4Q9HD34 91 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 ZFP64Q9NPA5 681 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 ACKR4Q9NPB9 350 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 TRMT1Q9NXH9 659 aaKnown RBP10.58□□□□□ -0.72
CSMD2-202ENST00000338325 QPCTLQ9NXS2 382 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 GPRC5BQ9NZH0 403 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 NINQ8N4C6 2090 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 MPDZO75970 2070 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 LRRC3CA6NJW4 275 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 DNALI1O14645 258 aaPredicted RBP10.58□□□□□ -0.72
CSMD2-202ENST00000338325 COX7A2P14406 83 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 CEACAM8P31997 349 aaPredicted RBP10.58□□□□□ -0.72
CSMD2-202ENST00000338325 KCNC1P48547 511 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 ID2Q02363 134 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 ZNF460Q14592 562 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 PPP1R7Q15435 360 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 TSNQ15631 228 aaKnown RBP10.58□□□□□ -0.72
CSMD2-202ENST00000338325 ACSF3Q4G176 576 aaPredicted RBP10.58□□□□□ -0.72
CSMD2-202ENST00000338325 PRAMEF20Q5VT98 475 aa10.58□□□□□ -0.72
CSMD2-202ENST00000338325 ADNP2Q6IQ32 1131 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms