RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 SLX4IPQ5VYV7 408 aa15.79■□□□□ 0.12
CDC42EP4-201ENST00000335793 ZNF544Q6NX49 715 aa15.79■□□□□ 0.12
CDC42EP4-201ENST00000335793 COMMD6Q7Z4G1 85 aa15.79■□□□□ 0.12
CDC42EP4-201ENST00000335793 C11orf96Q7Z7L8 435 aa15.79■□□□□ 0.12
CDC42EP4-201ENST00000335793 HERVK_113Q902F9 699 aa15.79■□□□□ 0.12
CDC42EP4-201ENST00000335793 SAMD11Q96NU1 681 aa15.79■□□□□ 0.12
CDC42EP4-201ENST00000335793 LYSMD1Q96S90 227 aa15.79■□□□□ 0.12
CDC42EP4-201ENST00000335793 KLHL42Q9P2K6 505 aa15.79■□□□□ 0.12
CDC42EP4-201ENST00000335793 CCL26Q9Y258 94 aa15.79■□□□□ 0.12
CDC42EP4-201ENST00000335793 CIB4A0PJX0 185 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 METTL15A6NJ78 407 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 CTDSP2O14595 271 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 CCL16O15467 120 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 RGS6P49758 472 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 ZNF763Q0D2J5 394 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 PTGES3Q15185 160 aaKnown RBP15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 TAB1Q15750 504 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 TBCEQ15813 527 aaPredicted RBP15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 LEXMQ3ZCV2 418 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 GRHL2Q6ISB3 625 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 FAM122CQ6P4D5 195 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 WDR48Q8TAF3 677 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 SORBS1Q9BX66 1292 aaKnown RBP15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 IL21Q9HBE4 155 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 BRD7Q9NPI1 651 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 SPATA6Q9NWH7 488 aaPredicted RBP15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 ISPDA4D126 451 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 ZNF250P15622 560 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 HOXB9P17482 250 aaPredicted RBP15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 CFL1P23528 166 aaKnown RBP15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 PRPH2P23942 346 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 IMPA1P29218 277 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 PCGF2P35227 344 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 HTR3AP46098 478 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 OLR1P78380 273 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 FADDQ13158 208 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 SLAMF1Q13291 335 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 RAB33AQ14088 237 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 BCL7AQ4VC05 210 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 DEF8Q6ZN54 512 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 FAM217AQ8IXS0 508 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 CPA6Q8N4T0 437 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 LINC00469Q8N7U9 141 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 EVA1BQ9NVM1 165 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 BTNL2Q9UIR0 455 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 DNMT3AQ9Y6K1 912 aaPredicted RBP15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 SMLR1H3BR10 107 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 GREM1O60565 184 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 IFNW1P05000 195 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 PKLRP30613 574 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 TBPL1P62380 186 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 SLC46A3Q7Z3Q1 461 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 RASGEF1AQ8N9B8 481 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 SLAIN1Q8ND83 568 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 RAB8BQ92930 207 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 NLNQ9BYT8 704 aa15.78■□□□□ 0.12
CDC42EP4-201ENST00000335793 CCDC88CQ9P219 2028 aa15.77■□□□□ 0.12
CDC42EP4-201ENST00000335793 SGTAO43765 313 aa15.77■□□□□ 0.12
CDC42EP4-201ENST00000335793 CNR2P34972 360 aa15.77■□□□□ 0.12
CDC42EP4-201ENST00000335793 IQCCQ4KMZ1 466 aa15.77■□□□□ 0.12
CDC42EP4-201ENST00000335793 CLVS2Q5SYC1 327 aa15.77■□□□□ 0.12
CDC42EP4-201ENST00000335793 NRARPQ7Z6K4 114 aa15.77■□□□□ 0.12
CDC42EP4-201ENST00000335793 GPR65Q8IYL9 337 aa15.77■□□□□ 0.12
CDC42EP4-201ENST00000335793 CYP4Z2PQ8N1L4 340 aa15.77■□□□□ 0.12
CDC42EP4-201ENST00000335793 ZNF740Q8NDX6 193 aa15.77■□□□□ 0.12
CDC42EP4-201ENST00000335793 TBC1D20Q96BZ9 403 aa15.77■□□□□ 0.12
CDC42EP4-201ENST00000335793 REPS1Q96D71 796 aa15.77■□□□□ 0.12
CDC42EP4-201ENST00000335793 PHOX2BQ99453 314 aa15.77■□□□□ 0.12
CDC42EP4-201ENST00000335793 PITX2Q99697 317 aa15.77■□□□□ 0.12
CDC42EP4-201ENST00000335793 LINC00597Q9H2U6 94 aa15.77■□□□□ 0.12
CDC42EP4-201ENST00000335793 DNAJC27Q9NZQ0 273 aa15.77■□□□□ 0.12
CDC42EP4-201ENST00000335793 ANGPT4Q9Y264 503 aa15.77■□□□□ 0.12
CDC42EP4-201ENST00000335793 PADI2Q9Y2J8 665 aa15.77■□□□□ 0.12
CDC42EP4-201ENST00000335793 PRAMEF33A0A0G2JMD5 474 aa15.77■□□□□ 0.11
CDC42EP4-201ENST00000335793 FADS2P1A8MWK0 482 aa15.77■□□□□ 0.11
CDC42EP4-201ENST00000335793 PRAMEF10O60809 474 aa15.77■□□□□ 0.11
CDC42EP4-201ENST00000335793 TNFRSF21O75509 655 aa15.77■□□□□ 0.11
CDC42EP4-201ENST00000335793 TNNI3P19429 210 aa15.77■□□□□ 0.11
CDC42EP4-201ENST00000335793 TM4SF4P48230 202 aa15.77■□□□□ 0.11
CDC42EP4-201ENST00000335793 CRYBA2P53672 197 aa15.77■□□□□ 0.11
CDC42EP4-201ENST00000335793 RAE1P78406 368 aaKnown RBP15.77■□□□□ 0.11
CDC42EP4-201ENST00000335793 HTR3DQ70Z44 454 aa15.77■□□□□ 0.11
CDC42EP4-201ENST00000335793 CDADC1Q9BWV3 514 aa15.77■□□□□ 0.11
CDC42EP4-201ENST00000335793 SLC46A2Q9BY10 475 aa15.77■□□□□ 0.11
CDC42EP4-201ENST00000335793 MMP28Q9H239 520 aa15.77■□□□□ 0.11
CDC42EP4-201ENST00000335793 WASH6PQ9NQA3 447 aa15.77■□□□□ 0.11
CDC42EP4-201ENST00000335793 CPNE7Q9UBL6 633 aa15.77■□□□□ 0.11
CDC42EP4-201ENST00000335793 PEX16Q9Y5Y5 336 aa15.77■□□□□ 0.11
CDC42EP4-201ENST00000335793 H0YIV9 168 aa15.76■□□□□ 0.11
CDC42EP4-201ENST00000335793 C8AP07357 584 aa15.76■□□□□ 0.11
CDC42EP4-201ENST00000335793 M6PRP20645 277 aa15.76■□□□□ 0.11
CDC42EP4-201ENST00000335793 DDCP20711 480 aa15.76■□□□□ 0.11
CDC42EP4-201ENST00000335793 VIPR1P32241 457 aa15.76■□□□□ 0.11
CDC42EP4-201ENST00000335793 RUNX1T1Q06455 604 aa15.76■□□□□ 0.11
CDC42EP4-201ENST00000335793 LINC00299Q6ZSB3 139 aa15.76■□□□□ 0.11
CDC42EP4-201ENST00000335793 ST6GAL2Q96JF0 529 aa15.76■□□□□ 0.11
CDC42EP4-201ENST00000335793 OR2AG1Q9H205 316 aa15.76■□□□□ 0.11
CDC42EP4-201ENST00000335793 CTPS2Q9NRF8 586 aa15.76■□□□□ 0.11
CDC42EP4-201ENST00000335793 SNTG1Q9NSN8 517 aa15.76■□□□□ 0.11
CDC42EP4-201ENST00000335793 ZNF226Q9NYT6 803 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms