RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ONECUT2O95948 504 aa20.27■□□□□ 0.83
TPM1-204ENST00000334895 IL6P05231 212 aa20.27■□□□□ 0.83
TPM1-204ENST00000334895 ADRB1P08588 477 aa20.27■□□□□ 0.83
TPM1-204ENST00000334895 FBLP22087 321 aaKnown RBP20.27■□□□□ 0.83
TPM1-204ENST00000334895 KIR3DL1P43629 444 aa20.27■□□□□ 0.83
TPM1-204ENST00000334895 TLR1Q15399 786 aa20.27■□□□□ 0.83
TPM1-204ENST00000334895 MAPRE2Q15555 327 aa20.27■□□□□ 0.83
TPM1-204ENST00000334895 DPY19L1Q2PZI1 675 aa20.27■□□□□ 0.83
TPM1-204ENST00000334895 ARHGAP40Q5TG30 622 aa20.27■□□□□ 0.83
TPM1-204ENST00000334895 LCN10Q6JVE6 187 aa20.27■□□□□ 0.83
TPM1-204ENST00000334895 RETREG3Q86VR2 466 aa20.27■□□□□ 0.83
TPM1-204ENST00000334895 DSELQ8IZU8 1212 aa20.27■□□□□ 0.83
TPM1-204ENST00000334895 DNAJB14Q8TBM8 379 aa20.27■□□□□ 0.83
TPM1-204ENST00000334895 TSPEARQ8WU66 669 aa20.27■□□□□ 0.83
TPM1-204ENST00000334895 COL26A1Q96A83 441 aa20.27■□□□□ 0.83
TPM1-204ENST00000334895 CMTM5Q96DZ9 223 aa20.27■□□□□ 0.83
TPM1-204ENST00000334895 SLC25A23Q9BV35 468 aa20.27■□□□□ 0.83
TPM1-204ENST00000334895 ULBP3Q9BZM4 244 aa20.27■□□□□ 0.83
TPM1-204ENST00000334895 RPF2Q9H7B2 306 aaKnown RBP20.27■□□□□ 0.83
TPM1-204ENST00000334895 AKIRIN1Q9H9L7 192 aaPredicted RBP20.27■□□□□ 0.83
TPM1-204ENST00000334895 TAS2R7Q9NYW3 318 aa20.27■□□□□ 0.83
TPM1-204ENST00000334895 A0A1W2PP18 115 aa20.26■□□□□ 0.83
TPM1-204ENST00000334895 MED19A0JLT2 244 aaPredicted RBP20.26■□□□□ 0.83
TPM1-204ENST00000334895 JRKO75564 520 aa20.26■□□□□ 0.83
TPM1-204ENST00000334895 S100A3P33764 101 aa20.26■□□□□ 0.83
TPM1-204ENST00000334895 RPL3P39023 403 aaKnown RBP20.26■□□□□ 0.83
TPM1-204ENST00000334895 XCR1P46094 333 aa20.26■□□□□ 0.83
TPM1-204ENST00000334895 CPA2P48052 419 aa20.26■□□□□ 0.83
TPM1-204ENST00000334895 SRSF11Q05519 484 aaKnown RBP20.26■□□□□ 0.83
TPM1-204ENST00000334895 ABHD18Q0P651 414 aa20.26■□□□□ 0.83
TPM1-204ENST00000334895 BNIP1Q12981 228 aa20.26■□□□□ 0.83
TPM1-204ENST00000334895 ERV3-1Q14264 604 aa20.26■□□□□ 0.83
TPM1-204ENST00000334895 NKAIN1Q4KMZ8 207 aa20.26■□□□□ 0.83
TPM1-204ENST00000334895 CIDECQ96AQ7 238 aaPredicted RBP20.26■□□□□ 0.83
TPM1-204ENST00000334895 EXOSC8Q96B26 276 aaKnown RBP20.26■□□□□ 0.83
TPM1-204ENST00000334895 NSL1Q96IY1 281 aa20.26■□□□□ 0.83
TPM1-204ENST00000334895 LRFN5Q96NI6 719 aa20.26■□□□□ 0.83
TPM1-204ENST00000334895 DUSP26Q9BV47 211 aa20.26■□□□□ 0.83
TPM1-204ENST00000334895 ASPSCR1Q9BZE9 553 aa20.26■□□□□ 0.83
TPM1-204ENST00000334895 SPRY4Q9C004 299 aa20.26■□□□□ 0.83
TPM1-204ENST00000334895 FOXJ2Q9P0K8 574 aa20.26■□□□□ 0.83
TPM1-204ENST00000334895 TRPC4Q9UBN4 977 aa20.26■□□□□ 0.83
TPM1-204ENST00000334895 SPACA6W5XKT8 324 aa20.26■□□□□ 0.83
TPM1-204ENST00000334895 TEX51A0A1B0GUA7 166 aa20.25■□□□□ 0.83
TPM1-204ENST00000334895 A0A1W2PS29 197 aa20.25■□□□□ 0.83
TPM1-204ENST00000334895 CCDC154A6NI56 674 aa20.25■□□□□ 0.83
TPM1-204ENST00000334895 MEN1O00255 615 aa20.25■□□□□ 0.83
TPM1-204ENST00000334895 SPINK2P20155 84 aa20.25■□□□□ 0.83
TPM1-204ENST00000334895 EFNA1P20827 205 aaPredicted RBP20.25■□□□□ 0.83
TPM1-204ENST00000334895 DCDP81605 110 aaKnown RBP20.25■□□□□ 0.83
TPM1-204ENST00000334895 PAGE3Q5JUK9 113 aa20.25■□□□□ 0.83
TPM1-204ENST00000334895 OR52E8Q6IFG1 317 aa20.25■□□□□ 0.83
TPM1-204ENST00000334895 ERMP1Q7Z2K6 904 aa20.25■□□□□ 0.83
TPM1-204ENST00000334895 GALNT15Q8N3T1 639 aa20.25■□□□□ 0.83
TPM1-204ENST00000334895 TBC1D20Q96BZ9 403 aa20.25■□□□□ 0.83
TPM1-204ENST00000334895 OR52E6Q96RD3 313 aa20.25■□□□□ 0.83
TPM1-204ENST00000334895 PRPF18Q99633 342 aaKnown RBP20.25■□□□□ 0.83
TPM1-204ENST00000334895 ZPBPQ9BS86 351 aa20.25■□□□□ 0.83
TPM1-204ENST00000334895 BHLHE41Q9C0J9 482 aaPredicted RBP20.25■□□□□ 0.83
TPM1-204ENST00000334895 SLAMF7Q9NQ25 335 aa20.25■□□□□ 0.83
TPM1-204ENST00000334895 LANCL2Q9NS86 450 aa20.25■□□□□ 0.83
TPM1-204ENST00000334895 CTSFQ9UBX1 484 aa20.25■□□□□ 0.83
TPM1-204ENST00000334895 UTS2RQ9UKP6 389 aa20.25■□□□□ 0.83
TPM1-204ENST00000334895 NUP210LQ5VU65 1888 aa20.25■□□□□ 0.83
TPM1-204ENST00000334895 CFLARO15519 480 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 TLX1P31314 330 aaPredicted RBP20.24■□□□□ 0.83
TPM1-204ENST00000334895 ACTN3Q08043 901 aaPredicted RBP20.24■□□□□ 0.83
TPM1-204ENST00000334895 ZNF750Q32MQ0 723 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 REP15Q6BDI9 236 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 SLC2A7Q6PXP3 512 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 MED25Q71SY5 747 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 ZC3H7AQ8IWR0 971 aaKnown RBP20.24■□□□□ 0.83
TPM1-204ENST00000334895 FBXO27Q8NI29 283 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 ADAMTS18Q8TE60 1221 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 RCN3Q96D15 328 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 CNRIP1Q96F85 164 aaPredicted RBP20.24■□□□□ 0.83
TPM1-204ENST00000334895 NPAS2Q99743 824 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 WDR41Q9HAD4 459 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 SERHLQ9NQF3 203 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 PRDM9Q9NQV7 894 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 ERVK-11Q9UQG0 969 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 NDUFAF1Q9Y375 327 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 PCDHGA8Q9Y5G5 932 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 SDK2Q58EX2 2172 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 DYTNA2CJ06 578 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 OR2W5A6NFC9 320 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 FGF17O60258 216 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 CDC123O75794 336 aaPredicted RBP20.24■□□□□ 0.83
TPM1-204ENST00000334895 STK17BO94768 372 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 DLGAP3O95886 979 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 FHP07954 510 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 DUSP2Q05923 314 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 ZSCAN26Q16670 478 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 VWA2Q5GFL6 755 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 ANKRD46Q86W74 232 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 OR4N5Q8IXE1 308 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 GALNT6Q8NCL4 622 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 KLHL29Q96CT2 875 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 ZNF681Q96N22 645 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 YIPF2Q9BWQ6 316 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms