RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 TTC30AQ86WT1 665 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 PASD1Q8IV76 773 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 ITPRIPQ8IWB1 547 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 GABRG1Q8N1C3 465 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 ZCCHC7Q8N3Z6 543 aaKnown RBP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 TTC30BQ8N4P2 665 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 RAB42Q8N4Z0 105 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 DTWD1Q8N5C7 304 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 NATD1Q8N6N6 113 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF283Q8N7M2 679 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 C8orf31Q8N9H6 132 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 LY6G5BQ8NDX9 201 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 SLC35B2Q8TB61 432 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 SLC22A8Q8TCC7 542 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 WFDC5Q8TCV5 224 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 SLC2A14Q8TDB8 520 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 FBLIM1Q8WUP2 373 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 PTCD3Q96EY7 689 aaKnown RBP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 PDXPQ96GD0 296 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 ANKRD27Q96NW4 1050 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 NSUN5Q96P11 429 aaKnown RBP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 TDRD1Q9BXT4 1180 aaKnown RBP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 BHMT2Q9H2M3 363 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 POFUT1Q9H488 388 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 FSCN3Q9NQT6 498 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 PCDHB16Q9NRJ7 776 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 KAAG1Q9UBP8 84 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 EGFL7Q9UHF1 273 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 PHF11Q9UIL8 331 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 FZD10Q9ULW2 581 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 HPCAL4Q9UM19 191 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 RBM8AQ9Y5S9 174 aaKnown RBP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 F8P00451 2351 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 SSPOA2VEC9 5147 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 PIEZO2Q9H5I5 2752 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 A0A087X1B8 175 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 AQP7P3A6NL99 342 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 GJE1A6NN92 205 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 LRRIQ3A6PVS8 624 aaPredicted RBP1.36□□□□□ -2.19
LINC00643-201ENST00000334389 ERI2A8K979 691 aaKnown RBP1.36□□□□□ -2.19
LINC00643-201ENST00000334389 IQCF6A8MYZ5 107 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 C16orf97H3BN30 126 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 UBE2CO00762 179 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 PHGDHO43175 533 aaKnown RBP1.36□□□□□ -2.19
LINC00643-201ENST00000334389 FOXH1O75593 365 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 C1QCP02747 245 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 DHRS4L1P0CG22 281 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 HLA-DPA1P20036 260 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 DRD5P21918 477 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 MAGEA6P43360 314 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 SLC6A9P48067 706 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 NPY2RP49146 381 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 MAN2A2P49641 1150 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 TMED10P49755 219 aaKnown RBP1.36□□□□□ -2.19
LINC00643-201ENST00000334389 LHX2P50458 406 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 MLLT10P55197 1068 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 DLX1P56177 255 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 SNAP25P60880 206 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 RPS23P62266 143 aaKnown RBP1.36□□□□□ -2.19
LINC00643-201ENST00000334389 CDK18Q07002 472 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 CDC16Q13042 620 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 CUL2Q13617 745 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 DDX39BQ13838 428 aaKnown RBP1.36□□□□□ -2.19
LINC00643-201ENST00000334389 TOB2Q14106 344 aaPredicted RBP1.36□□□□□ -2.19
LINC00643-201ENST00000334389 IRF3Q14653 427 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 SNRNP35Q16560 246 aaKnown RBP1.36□□□□□ -2.19
LINC00643-201ENST00000334389 TAF9Q16594 264 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 DECR1Q16698 335 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 MST1LQ2TV78 715 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF699Q32M78 642 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 TMEM30BQ3MIR4 351 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 GXYLT1Q4G148 440 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 TMEM35AQ53FP2 167 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 RNF187Q5TA31 235 aaPredicted RBP1.36□□□□□ -2.19
LINC00643-201ENST00000334389 B4GALNT3Q6L9W6 998 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 KDELC1Q6UW63 502 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 DPY19L3Q6ZPD9 716 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 GDPD3Q7L5L3 318 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 ABHD12BQ7Z5M8 362 aaPredicted RBP1.36□□□□□ -2.19
LINC00643-201ENST00000334389 THNSL2Q86YJ6 484 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 KLBQ86Z14 1044 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 CRLF3Q8IUI8 442 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 CILP2Q8IUL8 1156 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 APCDD1Q8J025 514 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 PRR18Q8N4B5 295 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 ARL6IP6Q8N6S5 226 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 RNF214Q8ND24 703 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 B3GNT7Q8NFL0 401 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 TFB1MQ8WVM0 346 aaKnown RBP1.36□□□□□ -2.19
LINC00643-201ENST00000334389 STARD4Q96DR4 205 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 LRR1Q96L50 414 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 CLUHP3Q96NS8 147 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 AMDHD1Q96NU7 426 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 IPO9Q96P70 1041 aaKnown RBP1.36□□□□□ -2.19
LINC00643-201ENST00000334389 REEP2Q9BRK0 252 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 YIPF4Q9BSR8 244 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 SYT11Q9BT88 431 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 TTTY12Q9BZ98 90 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 MIR1-1HGQ9H1L0 117 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms