RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 CCDC115Q96NT0 180 aa22■■□□□ 1.11
TSEN54-201ENST00000333213 PANX1Q96RD7 426 aa22■■□□□ 1.11
TSEN54-201ENST00000333213 SPRTNQ9H040 489 aaPredicted RBP22■■□□□ 1.11
TSEN54-201ENST00000333213 NAALAD2Q9Y3Q0 740 aa22■■□□□ 1.11
TSEN54-201ENST00000333213 RNASET2O00584 256 aaKnown RBP22■■□□□ 1.11
TSEN54-201ENST00000333213 GALR3O60755 368 aaPredicted RBP22■■□□□ 1.11
TSEN54-201ENST00000333213 ERN1O75460 977 aaKnown RBP22■■□□□ 1.11
TSEN54-201ENST00000333213 FOLR1P15328 257 aa22■■□□□ 1.11
TSEN54-201ENST00000333213 GRK6P43250 576 aa22■■□□□ 1.11
TSEN54-201ENST00000333213 MS4A2Q01362 244 aa22■■□□□ 1.11
TSEN54-201ENST00000333213 OGFRL1Q5TC84 451 aaPredicted RBP22■■□□□ 1.11
TSEN54-201ENST00000333213 OR5T3Q8NGG3 340 aa22■■□□□ 1.11
TSEN54-201ENST00000333213 ZNF768Q9H5H4 540 aaKnown RBP22■■□□□ 1.11
TSEN54-201ENST00000333213 ATAD3AQ9NVI7 634 aa22■■□□□ 1.11
TSEN54-201ENST00000333213 BTNL2Q9UIR0 455 aa22■■□□□ 1.11
TSEN54-201ENST00000333213 NELFEP18615 380 aaKnown RBP21.99■■□□□ 1.11
TSEN54-201ENST00000333213 LIM2P55344 173 aa21.99■■□□□ 1.11
TSEN54-201ENST00000333213 GPR19Q15760 415 aa21.99■■□□□ 1.11
TSEN54-201ENST00000333213 RUNDC3AQ59EK9 446 aa21.99■■□□□ 1.11
TSEN54-201ENST00000333213 ZFP1Q6P2D0 407 aa21.99■■□□□ 1.11
TSEN54-201ENST00000333213 PRMT9Q6P2P2 845 aa21.99■■□□□ 1.11
TSEN54-201ENST00000333213 ATOH1Q92858 354 aaPredicted RBP21.99■■□□□ 1.11
TSEN54-201ENST00000333213 NDUFA13Q9P0J0 144 aa21.99■■□□□ 1.11
TSEN54-201ENST00000333213 CES1P1Q9UKY3 287 aa21.99■■□□□ 1.11
TSEN54-201ENST00000333213 DAPP1Q9UN19 280 aa21.99■■□□□ 1.11
TSEN54-201ENST00000333213 ADAMTS20P59510 1910 aa21.99■■□□□ 1.11
TSEN54-201ENST00000333213 H3BNX3 289 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 CPSF4O95639 269 aaKnown RBP21.98■■□□□ 1.11
TSEN54-201ENST00000333213 DRD2P14416 443 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 HBA1P69905 142 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 SPEM2Q0P670 501 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 LIN52Q52LA3 116 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 SFT2D3Q587I9 215 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 ANXA8L1Q5VT79 327 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 C10orf111Q8N326 155 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 RCBTB1Q8NDN9 531 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 CNDP2Q96KP4 475 aaKnown RBP21.98■■□□□ 1.11
TSEN54-201ENST00000333213 CSF3RQ99062 836 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 NLNQ9BYT8 704 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 TRIM4Q9C037 500 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 ROGDIQ9GZN7 287 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 TAS2R7Q9NYW3 318 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 SGK494L7N484 410 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 FOXS1O43638 330 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 C6orf47O95873 294 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 ME2P23368 584 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 TRPC1P48995 793 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 ERFP50548 548 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 PCBP4P57723 403 aaKnown RBP21.98■■□□□ 1.11
TSEN54-201ENST00000333213 SLC14A1Q13336 389 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 ARHGAP22Q7Z5H3 698 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 CATSPER1Q8NEC5 780 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 OR4D9Q8NGE8 314 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 OR9A4Q8NGU2 314 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 RHBDD1Q8TEB9 315 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 EXOSC8Q96B26 276 aaKnown RBP21.98■■□□□ 1.11
TSEN54-201ENST00000333213 ZNF764Q96H86 408 aaPredicted RBP21.98■■□□□ 1.11
TSEN54-201ENST00000333213 LYARQ9NX58 379 aaKnown RBP21.98■■□□□ 1.11
TSEN54-201ENST00000333213 EHD3Q9NZN3 535 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 USP22Q9UPT9 525 aa21.98■■□□□ 1.11
TSEN54-201ENST00000333213 IGHV5-10-1A0A0J9YXX1 117 aa21.97■■□□□ 1.11
TSEN54-201ENST00000333213 A0A1W2PS29 197 aa21.97■■□□□ 1.11
TSEN54-201ENST00000333213 FITM1A5D6W6 292 aa21.97■■□□□ 1.11
TSEN54-201ENST00000333213 TXNDC9O14530 226 aa21.97■■□□□ 1.11
TSEN54-201ENST00000333213 B3GALT2O43825 422 aa21.97■■□□□ 1.11
TSEN54-201ENST00000333213 CD59P13987 128 aa21.97■■□□□ 1.11
TSEN54-201ENST00000333213 FRKP42685 505 aaPredicted RBP21.97■■□□□ 1.11
TSEN54-201ENST00000333213 HNRNPFP52597 415 aaKnown RBP21.97■■□□□ 1.11
TSEN54-201ENST00000333213 DYNC1I2Q13409 638 aaKnown RBP21.97■■□□□ 1.11
TSEN54-201ENST00000333213 SAMD4BQ5PRF9 694 aaKnown RBP21.97■■□□□ 1.11
TSEN54-201ENST00000333213 KMT5CQ86Y97 462 aa21.97■■□□□ 1.11
TSEN54-201ENST00000333213 CLEC4FQ8N1N0 589 aa21.97■■□□□ 1.11
TSEN54-201ENST00000333213 VPS37AQ8NEZ2 397 aa21.97■■□□□ 1.11
TSEN54-201ENST00000333213 OR8J3Q8NGG0 315 aa21.97■■□□□ 1.11
TSEN54-201ENST00000333213 DNAJB8Q8NHS0 232 aa21.97■■□□□ 1.11
TSEN54-201ENST00000333213 FAIM2Q9BWQ8 316 aa21.97■■□□□ 1.11
TSEN54-201ENST00000333213 PCDHAC1Q9H158 963 aa21.97■■□□□ 1.11
TSEN54-201ENST00000333213 SYNDIG1Q9H7V2 258 aa21.97■■□□□ 1.11
TSEN54-201ENST00000333213 ASCC3Q8N3C0 2202 aaKnown RBP21.96■■□□□ 1.11
TSEN54-201ENST00000333213 C1orf226A1L170 272 aa21.96■■□□□ 1.11
TSEN54-201ENST00000333213 HYKKA2RU49 373 aa21.96■■□□□ 1.11
TSEN54-201ENST00000333213 TOX3O15405 576 aaPredicted RBP21.96■■□□□ 1.11
TSEN54-201ENST00000333213 FLRT2O43155 660 aa21.96■■□□□ 1.11
TSEN54-201ENST00000333213 PABPC4LP0CB38 370 aaKnown RBP21.96■■□□□ 1.11
TSEN54-201ENST00000333213 CKMT2P17540 419 aa21.96■■□□□ 1.11
TSEN54-201ENST00000333213 ARL4DP49703 201 aa21.96■■□□□ 1.11
TSEN54-201ENST00000333213 DUSP3P51452 185 aaPredicted RBP21.96■■□□□ 1.11
TSEN54-201ENST00000333213 GAB1Q13480 694 aa21.96■■□□□ 1.11
TSEN54-201ENST00000333213 PRAMEF17Q5VTA0 474 aa21.96■■□□□ 1.11
TSEN54-201ENST00000333213 ZNF621Q6ZSS3 439 aa21.96■■□□□ 1.11
TSEN54-201ENST00000333213 PHF12Q96QT6 1004 aa21.96■■□□□ 1.11
TSEN54-201ENST00000333213 CPPED1Q9BRF8 314 aaPredicted RBP21.96■■□□□ 1.11
TSEN54-201ENST00000333213 ENAMQ9NRM1 1142 aa21.96■■□□□ 1.11
TSEN54-201ENST00000333213 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.96■■□□□ 1.11
TSEN54-201ENST00000333213 UTS2RQ9UKP6 389 aa21.96■■□□□ 1.11
TSEN54-201ENST00000333213 CFAP54Q96N23 3096 aa21.96■■□□□ 1.11
TSEN54-201ENST00000333213 A0A0A6YYC8 382 aaPredicted RBP21.96■■□□□ 1.11
TSEN54-201ENST00000333213 A0A1W2PRB8 838 aa21.96■■□□□ 1.11
TSEN54-201ENST00000333213 TMEM150CB9EJG8 249 aa21.96■■□□□ 1.11
TSEN54-201ENST00000333213 I3L1I5 382 aaPredicted RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms