RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 FAM180BQ6P0A1 224 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 RDH10Q8IZV5 341 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 TCEANCQ8N8B7 351 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 PCSK9Q8NBP7 692 aaKnown RBP22.52■■□□□ 1.2
TSKU-201ENST00000333090 ADAMTS19Q8TE59 1207 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 NEIL2Q969S2 332 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 TSSK6Q9BXA6 273 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 ZDHHC6Q9H6R6 413 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 RNF121Q9H920 327 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 RC3H2Q9HBD1 1191 aaKnown RBP22.52■■□□□ 1.2
TSKU-201ENST00000333090 TMCC3Q9ULS5 477 aa22.52■■□□□ 1.2
TSKU-201ENST00000333090 OR10H3O60404 316 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 NCF4Q15080 339 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 SLC35F1Q5T1Q4 408 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 XKRXQ6PP77 449 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 LILRA3Q8N6C8 439 aaPredicted RBP22.51■■□□□ 1.19
TSKU-201ENST00000333090 CELF5Q8N6W0 485 aaKnown RBP22.51■■□□□ 1.19
TSKU-201ENST00000333090 NANOGP1Q8N7R0 232 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 CREB3L4Q8TEY5 395 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 TRIM63Q969Q1 353 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 VOPP1Q96AW1 172 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 CXorf40BQ96DE9 158 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 TXNL4BQ9NX01 149 aaKnown RBP22.51■■□□□ 1.19
TSKU-201ENST00000333090 REV1Q9UBZ9 1251 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 RPL36Q9Y3U8 105 aaKnown RBP22.51■■□□□ 1.19
TSKU-201ENST00000333090 OR6C70A6NIJ9 312 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 CPNE3O75131 537 aaKnown RBP22.51■■□□□ 1.19
TSKU-201ENST00000333090 ADAP00813 363 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 ARAFP10398 606 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 SNRPD1P62314 119 aaKnown RBP22.51■■□□□ 1.19
TSKU-201ENST00000333090 SEC23BQ15437 767 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 RPS26P11Q5JNZ5 115 aaPredicted RBP22.51■■□□□ 1.19
TSKU-201ENST00000333090 ARMCX6Q7L4S7 300 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 RNF180Q86T96 592 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 ENKURQ8TC29 256 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 DHRS1Q96LJ7 313 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 IRF2BPLQ9H1B7 796 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 ARRDC5A6NEK1 342 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 GREM1O60565 184 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 GPR37L1O60883 481 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 FURINP09958 794 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 KIR2DL3P43628 341 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 GPNMBQ14956 572 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 SYTL3Q4VX76 610 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 PAMR1Q6UXH9 720 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 USP30Q70CQ3 517 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 RIPOR3Q96MK2 946 aa22.51■■□□□ 1.19
TSKU-201ENST00000333090 TGFB1P01137 390 aa22.5■■□□□ 1.19
TSKU-201ENST00000333090 IMPA1P29218 277 aa22.5■■□□□ 1.19
TSKU-201ENST00000333090 XKP51811 444 aa22.5■■□□□ 1.19
TSKU-201ENST00000333090 MLLT11Q13015 90 aaPredicted RBP22.5■■□□□ 1.19
TSKU-201ENST00000333090 SAXO2Q658L1 398 aa22.5■■□□□ 1.19
TSKU-201ENST00000333090 ERAP2Q6P179 960 aa22.5■■□□□ 1.19
TSKU-201ENST00000333090 MED27Q6P2C8 311 aa22.5■■□□□ 1.19
TSKU-201ENST00000333090 TMIGD1Q6UXZ0 262 aa22.5■■□□□ 1.19
TSKU-201ENST00000333090 PROKR2Q8NFJ6 384 aa22.5■■□□□ 1.19
TSKU-201ENST00000333090 LRFN2Q9ULH4 789 aa22.5■■□□□ 1.19
TSKU-201ENST00000333090 MSL3P1P0C860 447 aa22.5■■□□□ 1.19
TSKU-201ENST00000333090 GPC1P35052 558 aa22.5■■□□□ 1.19
TSKU-201ENST00000333090 TAS2R50P59544 299 aa22.5■■□□□ 1.19
TSKU-201ENST00000333090 TXNDC8Q6A555 127 aa22.5■■□□□ 1.19
TSKU-201ENST00000333090 FAM181AQ8N9Y4 354 aa22.5■■□□□ 1.19
TSKU-201ENST00000333090 WDR48Q8TAF3 677 aa22.5■■□□□ 1.19
TSKU-201ENST00000333090 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.5■■□□□ 1.19
TSKU-201ENST00000333090 NELL2Q99435 816 aa22.5■■□□□ 1.19
TSKU-201ENST00000333090 OR51B5Q9H339 312 aa22.5■■□□□ 1.19
TSKU-201ENST00000333090 GPBP1L1Q9HC44 474 aaPredicted RBP22.5■■□□□ 1.19
TSKU-201ENST00000333090 KCND3Q9UK17 655 aa22.5■■□□□ 1.19
TSKU-201ENST00000333090 YIPF1Q9Y548 306 aa22.5■■□□□ 1.19
TSKU-201ENST00000333090 ERVH48-1M5A8F1 160 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 SGTAO43765 313 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 PSIP1O75475 530 aaKnown RBP22.49■■□□□ 1.19
TSKU-201ENST00000333090 SLCO2B1O94956 709 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 MLLT3P42568 568 aaPredicted RBP22.49■■□□□ 1.19
TSKU-201ENST00000333090 RPS26P62854 115 aaKnown RBP22.49■■□□□ 1.19
TSKU-201ENST00000333090 ILKQ13418 452 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 QPRTQ15274 297 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 SYCE2Q6PIF2 218 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 LYPD8Q6UX82 237 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 BTN2A2Q8WVV5 523 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 ECHDC3Q96DC8 303 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 GULP1Q9UBP9 304 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 PLEKHB1Q9UF11 243 aaPredicted RBP22.49■■□□□ 1.19
TSKU-201ENST00000333090 KCNE2Q9Y6J6 123 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 PCM1Q15154 2024 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 TPD52L2O43399 206 aaKnown RBP22.49■■□□□ 1.19
TSKU-201ENST00000333090 ALPPP05187 535 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 DSTNP60981 165 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 CYP4F8P98187 520 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 SREBF2Q12772 1141 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 DDI2Q5TDH0 399 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 KIAA1841Q6NSI8 718 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 IQCF1Q8N6M8 205 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 GDPD1Q8N9F7 314 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 TMEM159Q96B96 161 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 RACGAP1Q9H0H5 632 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 GIMAP4Q9NUV9 329 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 ACOXLQ9NUZ1 547 aa22.49■■□□□ 1.19
TSKU-201ENST00000333090 YARS2Q9Y2Z4 477 aaKnown RBP22.49■■□□□ 1.19
TSKU-201ENST00000333090 A0A1W2PRB8 838 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms