RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 C6orf120Q7Z4R8 191 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 HDDC3Q8N4P3 179 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 AMER3Q8N944 861 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 TP53I13Q8NBR0 393 aaPredicted RBP13.84□□□□□ -0.19
TPM3-206ENST00000330188 PROX1Q92786 737 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 GGHQ92820 318 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 EXOSC8Q96B26 276 aaKnown RBP13.84□□□□□ -0.19
TPM3-206ENST00000330188 ZNF764Q96H86 408 aaPredicted RBP13.84□□□□□ -0.19
TPM3-206ENST00000330188 TMEM19Q96HH6 336 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 C12orf66Q96MD2 445 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 FERD3LQ96RJ6 166 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 RSPO3Q9BXY4 272 aaPredicted RBP13.84□□□□□ -0.19
TPM3-206ENST00000330188 ALOXE3Q9BYJ1 711 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 CERS4Q9HA82 394 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 ZNF556Q9HAH1 456 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 TEX10Q9NXF1 929 aaPredicted RBP13.84□□□□□ -0.19
TPM3-206ENST00000330188 KCND3Q9UK17 655 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 ADAM29Q9UKF5 820 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 SNX11Q9Y5W9 270 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 IGKV1-8A0A0C4DH67 115 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 C5orf58C9J3I9 102 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 POU2F1P14859 743 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 TEAD1P28347 426 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 C21orf33P30042 268 aaPredicted RBP13.84□□□□□ -0.19
TPM3-206ENST00000330188 IDUAP35475 653 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 ERVK-21P61565 698 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 ENPP2Q13822 863 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 MAPK11Q15759 364 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 IGFN1Q86VF2 1251 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 PLD3Q8IV08 490 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 DEPDC4Q8N2C3 294 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 GPR32P1Q8NGA4 272 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 DYNC2LI1Q8TCX1 351 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 UTP15Q8TED0 518 aaKnown RBP13.84□□□□□ -0.19
TPM3-206ENST00000330188 KLK6Q92876 244 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 UCN3Q969E3 161 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 VMP1Q96GC9 406 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 AICDAQ9GZX7 198 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 OSGEPL1Q9H4B0 414 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 AMBNQ9NP70 447 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 TBCCD1Q9NVR7 557 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 RHBDL2Q9NX52 303 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 SELENONQ9NZV5 590 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 RHCGQ9UBD6 479 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 ARRDC5A6NEK1 342 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 CLCA1A8K7I4 914 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 M0R3G1 203 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 TOR1BO14657 336 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 FFAR1O14842 300 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 LATO43561 262 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 MFN2O95140 757 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 PAK4O96013 591 aaPredicted RBP13.83□□□□□ -0.2
TPM3-206ENST00000330188 ADH1BP00325 375 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 CDK1P06493 297 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 CD36P16671 472 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 ZNF12P17014 697 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 DDX5P17844 614 aaKnown RBP13.83□□□□□ -0.2
TPM3-206ENST00000330188 EIF2DP41214 584 aaKnown RBP13.83□□□□□ -0.2
TPM3-206ENST00000330188 GSTM5P46439 218 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 LIM2P55344 173 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 NCS1P62166 190 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 OCA2Q04671 838 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 PRDX1Q06830 199 aaKnown RBP13.83□□□□□ -0.2
TPM3-206ENST00000330188 TBCEQ15813 527 aaPredicted RBP13.83□□□□□ -0.2
TPM3-206ENST00000330188 RAB42Q8N4Z0 105 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 DENND6BQ8NEG7 585 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 CREB3L4Q8TEY5 395 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 PHF10Q8WUB8 498 aaKnown RBP13.83□□□□□ -0.2
TPM3-206ENST00000330188 FCGR1BQ92637 280 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 RPL3LQ92901 407 aaKnown RBP13.83□□□□□ -0.2
TPM3-206ENST00000330188 RAB8BQ92930 207 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 MYDGFQ969H8 173 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 GTPBP3Q969Y2 492 aaKnown RBP13.83□□□□□ -0.2
TPM3-206ENST00000330188 ZBED6CLQ96FA7 236 aaPredicted RBP13.83□□□□□ -0.2
TPM3-206ENST00000330188 CAMK1GQ96NX5 476 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 TEFMQ96QE5 360 aaKnown RBP13.83□□□□□ -0.2
TPM3-206ENST00000330188 ALPK1Q96QP1 1244 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 ITPAQ9BY32 194 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 XKR8Q9H6D3 395 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 DDX31Q9H8H2 851 aaKnown RBP13.83□□□□□ -0.2
TPM3-206ENST00000330188 AKIP1Q9NQ31 210 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 B3GNT3Q9Y2A9 372 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.83□□□□□ -0.2
TPM3-206ENST00000330188 DOCK8Q8NF50 2099 aa13.83□□□□□ -0.2
TPM3-206ENST00000330188 A0A0A6YYD5 115 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 A0A0G2JN53 185 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 CLDN24A6NM45 220 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 HMGN4O00479 90 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 PPM1DO15297 605 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 CLEC3AO75596 197 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 APODP05090 189 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 C5AR1P21730 350 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 NUDT6P53370 316 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 ZNF846Q147U1 533 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 SPDYE7PQ495Y7 208 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 ZNF770Q6IQ21 691 aaPredicted RBP13.82□□□□□ -0.2
TPM3-206ENST00000330188 LINC00299Q6ZSB3 139 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 ADCK2Q7Z695 626 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 SLC44A2Q8IWA5 706 aaPredicted RBP13.82□□□□□ -0.2
TPM3-206ENST00000330188 AQP11Q8NBQ7 271 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms