RNA–Protein interactions for RNA: ENST00000324394.7

ZNF404-201, Transcript of zinc finger protein 404, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF404, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-201ENST00000324394 HDDC3Q8N4P3 179 aa3.52□□□□□ -1.85
ZNF404-201ENST00000324394 ZNF614Q8N883 585 aa3.52□□□□□ -1.85
ZNF404-201ENST00000324394 NUP37Q8NFH4 326 aa3.52□□□□□ -1.85
ZNF404-201ENST00000324394 OR6M1Q8NGM8 313 aa3.52□□□□□ -1.85
ZNF404-201ENST00000324394 RAB39BQ96DA2 213 aa3.52□□□□□ -1.85
ZNF404-201ENST00000324394 FAM111AQ96PZ2 611 aa3.52□□□□□ -1.85
ZNF404-201ENST00000324394 KRT23Q9C075 422 aa3.52□□□□□ -1.85
ZNF404-201ENST00000324394 SIRPDQ9H106 197 aa3.52□□□□□ -1.85
ZNF404-201ENST00000324394 MED20Q9H944 212 aa3.52□□□□□ -1.85
ZNF404-201ENST00000324394 UBE2TQ9NPD8 197 aaPredicted RBP3.52□□□□□ -1.85
ZNF404-201ENST00000324394 IL1RAPQ9NPH3 570 aa3.52□□□□□ -1.85
ZNF404-201ENST00000324394 EXOGQ9Y2C4 368 aaKnown RBP3.52□□□□□ -1.85
ZNF404-201ENST00000324394 MRPS2Q9Y399 296 aaKnown RBP3.52□□□□□ -1.85
ZNF404-201ENST00000324394 MRPS18CQ9Y3D5 142 aaKnown RBP3.52□□□□□ -1.85
ZNF404-201ENST00000324394 WIPI2Q9Y4P8 454 aa3.52□□□□□ -1.85
ZNF404-201ENST00000324394 ZHX2Q9Y6X8 837 aa3.52□□□□□ -1.85
ZNF404-201ENST00000324394 IGHV3-20A0A0C4DH32 117 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 A0A0U1RRA0 63 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 MEX3AA1L020 520 aaKnown RBP3.51□□□□□ -1.85
ZNF404-201ENST00000324394 MPTX1A8MV57 137 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 K7EQD1 137 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 CCSO14618 274 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 NXPH4O95158 308 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 MT-ATP6P00846 226 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 AOC1P19801 751 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 CCNA2P20248 432 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 FCARP24071 287 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 MARCKSP29966 332 aaPredicted RBP3.51□□□□□ -1.85
ZNF404-201ENST00000324394 CD86P42081 329 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 LIMK2P53671 638 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 ATP12AP54707 1039 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 NLRP11P59045 1033 aaKnown RBP3.51□□□□□ -1.85
ZNF404-201ENST00000324394 CCDC40Q4G0X9 1142 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 CMPK2Q5EBM0 449 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 HERC4Q5GLZ8 1057 aaPredicted RBP3.51□□□□□ -1.85
ZNF404-201ENST00000324394 BSPRYQ5W0U4 402 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 NEPROQ6NW34 567 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 TAF8Q7Z7C8 310 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 ADGRD2Q7Z7M1 963 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 OR4N5Q8IXE1 308 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 C16orf58Q96GQ5 468 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 ATXN7L3BQ96GX2 97 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 RPGRIP1Q96KN7 1286 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 NSMCE2Q96MF7 247 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 RAB40CQ96S21 281 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 KRTAP2-2Q9BYT5 123 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 BARHL1Q9BZE3 327 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 GDF3Q9NR23 364 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.51□□□□□ -1.85
ZNF404-201ENST00000324394 DIMT1Q9UNQ2 313 aaKnown RBP3.51□□□□□ -1.85
ZNF404-201ENST00000324394 NPC1L1Q9UHC9 1359 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 ARHGAP42A6NI28 874 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 TNFSF12O43508 249 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 NME2P1O60361 137 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 TGFAP01135 160 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 CXCL10P02778 98 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 ZCCHC18P0CG32 403 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 RBBP4Q09028 425 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 HSPA14Q0VDF9 509 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 EXOSC7Q15024 291 aaKnown RBP3.51□□□□□ -1.85
ZNF404-201ENST00000324394 RFTN2Q52LD8 501 aaPredicted RBP3.51□□□□□ -1.85
ZNF404-201ENST00000324394 GPAT3Q53EU6 434 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 MPPE1Q53F39 396 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 TOR1AIP1Q5JTV8 583 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 RTL6Q6ICC9 239 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 ZNF730Q6ZMV8 503 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 BNIPLQ7Z465 357 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 C17orf64Q86WR6 236 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 PARP8Q8N3A8 854 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 RELL2Q8NC24 303 aaPredicted RBP3.51□□□□□ -1.85
ZNF404-201ENST00000324394 LEMD2Q8NC56 503 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 HCAR2Q8TDS4 363 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 MRPL24Q96A35 216 aaKnown RBP3.51□□□□□ -1.85
ZNF404-201ENST00000324394 SAMD8Q96LT4 415 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 TAAR6Q96RI8 345 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 SPAG8Q99932 426 aaPredicted RBP3.51□□□□□ -1.85
ZNF404-201ENST00000324394 PINK1Q9BXM7 581 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 PLEKHA3Q9HB20 300 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 BARHL2Q9NY43 387 aa3.51□□□□□ -1.85
ZNF404-201ENST00000324394 HOOK1Q9UJC3 728 aaKnown RBP3.51□□□□□ -1.85
ZNF404-201ENST00000324394 KIF7Q2M1P5 1343 aa3.5□□□□□ -1.85
ZNF404-201ENST00000324394 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.5□□□□□ -1.85
ZNF404-201ENST00000324394 TMEM89A2RUT3 159 aa3.5□□□□□ -1.85
ZNF404-201ENST00000324394 OR5H15A6NDH6 313 aa3.5□□□□□ -1.85
ZNF404-201ENST00000324394 MTRF1O75570 445 aaKnown RBP3.5□□□□□ -1.85
ZNF404-201ENST00000324394 OR6B1O95007 311 aa3.5□□□□□ -1.85
ZNF404-201ENST00000324394 PTBP3O95758 552 aaKnown RBP3.5□□□□□ -1.85
ZNF404-201ENST00000324394 KRT5P13647 590 aa3.5□□□□□ -1.85
ZNF404-201ENST00000324394 IL10P22301 178 aa3.5□□□□□ -1.85
ZNF404-201ENST00000324394 HSPA1LP34931 641 aa3.5□□□□□ -1.85
ZNF404-201ENST00000324394 CCL11P51671 97 aa3.5□□□□□ -1.85
ZNF404-201ENST00000324394 NDST2P52849 883 aa3.5□□□□□ -1.85
ZNF404-201ENST00000324394 ZNF177Q13360 481 aaPredicted RBP3.5□□□□□ -1.85
ZNF404-201ENST00000324394 GCKRQ14397 625 aa3.5□□□□□ -1.85
ZNF404-201ENST00000324394 KARSQ15046 597 aaKnown RBP3.5□□□□□ -1.85
ZNF404-201ENST00000324394 NECTIN1Q15223 517 aa3.5□□□□□ -1.85
ZNF404-201ENST00000324394 TRADDQ15628 312 aa3.5□□□□□ -1.85
ZNF404-201ENST00000324394 CARTPTQ16568 116 aa3.5□□□□□ -1.85
ZNF404-201ENST00000324394 KNOP1Q1ED39 458 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms