RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 PIK3CBP42338 1070 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 RGS6P49758 472 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 TSTQ16762 297 aaKnown RBP16.58■□□□□ 0.24
COL9A1-201ENST00000320755 FRMPD2BQ6IN97 320 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 AMZ2Q86W34 360 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 HEATR4Q86WZ0 1026 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 CELF5Q8N6W0 485 aaKnown RBP16.58■□□□□ 0.24
COL9A1-201ENST00000320755 POC5Q8NA72 575 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 FAM83FQ8NEG4 500 aaPredicted RBP16.58■□□□□ 0.24
COL9A1-201ENST00000320755 OR2L2Q8NH16 312 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 WDR34Q96EX3 536 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 LGR4Q9BXB1 951 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 EPHX3Q9H6B9 360 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 DNAJC27Q9NZQ0 273 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 IFT52Q9Y366 437 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 GLOD5A6NK44 160 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 E9PQ18 207 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 SCAMP1O15126 338 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 RECKO95980 971 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 GABRB1P18505 474 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 RHCEP18577 417 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 CRISP1P54107 249 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 PCBP3P57721 371 aaKnown RBP16.57■□□□□ 0.24
COL9A1-201ENST00000320755 DEPDC1Q5TB30 811 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 AMER2Q8N7J2 671 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 FBXO15Q8NCQ5 510 aaPredicted RBP16.57■□□□□ 0.24
COL9A1-201ENST00000320755 RSPO3Q9BXY4 272 aaPredicted RBP16.57■□□□□ 0.24
COL9A1-201ENST00000320755 KLHL25Q9H0H3 589 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 INIPQ9NRY2 104 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 MARK1Q9P0L2 795 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 LRRK1Q38SD2 2015 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 PSMD11O00231 422 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 DSCR3O14972 297 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 TBX6O95947 436 aaPredicted RBP16.57■□□□□ 0.24
COL9A1-201ENST00000320755 ALPPL2P10696 532 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 ALOX12P18054 663 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 WASP42768 502 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 PRKAG1P54619 331 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 TPRG1LQ5T0D9 272 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 USP43Q70EL4 1123 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 C6orf120Q7Z4R8 191 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 AMER3Q8N944 861 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 XAGE5Q8WWM1 108 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 ITFG2Q969R8 447 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 UBE2E3Q969T4 207 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 OR52A5Q9H2C5 316 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 OSGEPL1Q9H4B0 414 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 QPCTLQ9NXS2 382 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 AHSPQ9NZD4 102 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 TMCC3Q9ULS5 477 aa16.57■□□□□ 0.24
COL9A1-201ENST00000320755 CARNS1A5YM72 827 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 PRR23AA6NEV1 266 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 METTL15A6NJ78 407 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 OR1F1O43749 312 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 DLGAP3O95886 979 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 ITGB7P26010 798 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 S100A5P33763 92 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 SEC23BQ15437 767 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 KHDRBS2Q5VWX1 349 aaKnown RBP16.56■□□□□ 0.24
COL9A1-201ENST00000320755 TMC5Q6UXY8 1006 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 C11orf74Q86VG3 221 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 CXorf40AQ8TE69 158 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 TM4SF18Q96CE8 201 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 OTUB2Q96DC9 234 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 MGLLQ99685 303 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 KCNS3Q9BQ31 491 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 YIPF4Q9BSR8 244 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 CDADC1Q9BWV3 514 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 TRPM6Q9BX84 2022 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 MMP27Q9H306 513 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 RERGLQ9H628 205 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 CLN6Q9NWW5 311 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 DEC1Q9P2X7 70 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 TRPC4Q9UBN4 977 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 CHD9Q3L8U1 2897 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 KIAA1671Q9BY89 1806 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 PDPK1O15530 556 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 ADH1CP00326 375 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 CBLP22681 906 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 EIF2DP41214 584 aaKnown RBP16.56■□□□□ 0.24
COL9A1-201ENST00000320755 TUBA1BP68363 451 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 DOC2BQ14184 412 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 HNRNPA1L2Q32P51 320 aaKnown RBP16.56■□□□□ 0.24
COL9A1-201ENST00000320755 TUBA1AQ71U36 451 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 CCDC80Q76M96 950 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 FAM129CQ86XR2 697 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 OR5D16Q8NGK9 328 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 TEX10Q9NXF1 929 aaPredicted RBP16.56■□□□□ 0.24
COL9A1-201ENST00000320755 SPATA7Q9P0W8 599 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 INSL6Q9Y581 213 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 TBC1D3BA6NDS4 549 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 ENTPD6O75354 484 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 PRKRAO75569 313 aaKnown RBP16.56■□□□□ 0.24
COL9A1-201ENST00000320755 FGF19O95750 216 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 TNNI3P19429 210 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 DDCP20711 480 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 KELP23276 732 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 ZNF234Q14588 700 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 TCEA2Q15560 299 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 WDR53Q7Z5U6 358 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms