RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 EBAG9O00559 213 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 CYR61O00622 381 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 FGF17O60258 216 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 COX4I1P13073 169 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 RNH1P13489 461 aaKnown RBP14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 ATP4BP51164 291 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 RAB38P57729 211 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 DCDP81605 110 aaKnown RBP14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 FOLH1Q04609 750 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 DUSP2Q05923 314 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 EIF3IQ13347 325 aaKnown RBP14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 CYLC2Q14093 348 aaPredicted RBP14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 DSG2Q14126 1118 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 RCAN2Q14206 197 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 MPEG1Q2M385 716 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 C6orf10Q5SRN2 563 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 TMEM164Q5U3C3 297 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 CYB5D1Q6P9G0 228 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 BLOC1S3Q6QNY0 202 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 COX15Q7KZN9 410 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 CLEC4FQ8N1N0 589 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 GALNT15Q8N3T1 639 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 AMER2Q8N7J2 671 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 FBXO27Q8NI29 283 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 TBC1D20Q96BZ9 403 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 RCN3Q96D15 328 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 SLC39A3Q9BRY0 314 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 ASPSCR1Q9BZE9 553 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 CHST8Q9H2A9 424 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 WDR41Q9HAD4 459 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 SLAMF8Q9P0V8 285 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 KLK13Q9UKR3 277 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 MAP4K5Q9Y4K4 846 aa14.51□□□□□ -0.09
PDLIM5-202ENST00000318007 FAM234BA2RU67 622 aa14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 ASPDHA6ND91 283 aa14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 ANGPT2O15123 496 aa14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 GSNP06396 782 aa14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 SNRPB2P08579 225 aaKnown RBP14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 ACPPP15309 386 aa14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 TLX1P31314 330 aaPredicted RBP14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 S100A3P33764 101 aa14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 RORAP35398 523 aa14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 KIR3DL1P43629 444 aa14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 HSPB3Q12988 150 aa14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 PAGE3Q5JUK9 113 aa14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 TIPARPQ7Z3E1 657 aaKnown RBP14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 MAGED4Q96JG8 741 aa14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 DUSP26Q9BV47 211 aa14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 LYRM4Q9HD34 91 aa14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 MKL2Q9ULH7 1088 aa14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 CDC14AQ9UNH5 594 aa14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 PCDHA9Q9Y5H5 950 aa14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 AK5Q9Y6K8 562 aa14.5□□□□□ -0.09
PDLIM5-202ENST00000318007 C1orf226A1L170 272 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 CFLARO15519 480 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 GUCY1B2O75343 617 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 CPSF4O95639 269 aaKnown RBP14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 KLK3P07288 261 aaPredicted RBP14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 FHP07954 510 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 PPP2R1BP30154 601 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 EFNA3P52797 238 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 ARFIP1P53367 373 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 MXRA7P84157 204 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 SLC48A1Q6P1K1 146 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 PRMT9Q6P2P2 845 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 IKBIPQ70UQ0 350 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 TMPRSS7Q7RTY8 843 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 SZRD1Q7Z422 152 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 PARP9Q8IXQ6 854 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 CCDC116Q8IYX3 515 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 ADCY4Q8NFM4 1077 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 PPWD1Q96BP3 646 aaKnown RBP14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 MIEF2Q96C03 454 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 MVB12AQ96EY5 273 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 INPP5KQ9BT40 448 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 TMEM121BQ9BXQ6 578 aaPredicted RBP14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 ANKRA2Q9H9E1 313 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 SLAMF7Q9NQ25 335 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 ZNF282Q9UDV7 671 aaPredicted RBP14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 CCDC88CQ9P219 2028 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 SDK2Q58EX2 2172 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 FBP2O00757 339 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 BMP10O95393 424 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 ESRRAP11474 423 aaPredicted RBP14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 SLC5A2P31639 672 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 NUDT2P50583 147 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 CLNS1AP54105 237 aaKnown RBP14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 EMP3P54852 163 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 ZNF385CQ66K41 422 aaPredicted RBP14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 REP15Q6BDI9 236 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 ZNF551Q7Z340 670 aaPredicted RBP14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 RETREG3Q86VR2 466 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 DNAJB14Q8TBM8 379 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 STT3BQ8TCJ2 826 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 TSLPQ969D9 159 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 CNRIP1Q96F85 164 aaPredicted RBP14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 PRPF18Q99633 342 aaKnown RBP14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 POLR1BQ9H9Y6 1135 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 MS4A12Q9NXJ0 267 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 NDUFAF1Q9Y375 327 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms