RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 GALNT6Q8NCL4 622 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 ZNF740Q8NDX6 193 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 OR5K2Q8NHB8 316 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 HUS1BQ8NHY5 278 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 SLC13A3Q8WWT9 602 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 RAD51AP1Q96B01 352 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 PPM1MQ96MI6 270 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 INSM2Q96T92 566 aaPredicted RBP12.45□□□□□ -0.42
CPNE1-201ENST00000317677 NXF2Q9GZY0 626 aaKnown RBP12.45□□□□□ -0.42
CPNE1-201ENST00000317677 BTBD1Q9H0C5 482 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 EPS8L2Q9H6S3 715 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 FGF22Q9HCT0 170 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 TOR4AQ9NXH8 423 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 PAQR5Q9NXK6 330 aaPredicted RBP12.45□□□□□ -0.42
CPNE1-201ENST00000317677 SLC25A37Q9NYZ2 338 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 VAPAQ9P0L0 249 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 EGFL7Q9UHF1 273 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 KCNE2Q9Y6J6 123 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 LRP4O75096 1905 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 C10orf142B7Z368 130 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 GPR89AB7ZAQ6 455 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 H0Y8X5 98 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 CAPN5O15484 640 aaPredicted RBP12.45□□□□□ -0.42
CPNE1-201ENST00000317677 SEMA3DO95025 777 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 ALPLP05186 524 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 PGRP06401 933 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 GPR89BP0CG08 455 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 C1GALT1C1LP0DN25 315 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 HOXB9P17482 250 aaPredicted RBP12.45□□□□□ -0.42
CPNE1-201ENST00000317677 GABRG2P18507 467 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 KELP23276 732 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 SRP54P61011 504 aaKnown RBP12.45□□□□□ -0.42
CPNE1-201ENST00000317677 EMX1Q04741 257 aaPredicted RBP12.45□□□□□ -0.42
CPNE1-201ENST00000317677 LIPEQ05469 1076 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 ZNF33BQ06732 778 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 PWP1Q13610 501 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 SLBPQ14493 270 aaKnown RBP eCLIP12.45□□□□□ -0.42
CPNE1-201ENST00000317677 ZNF404Q494X3 552 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 GTDC1Q4AE62 458 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 TMEM236Q5W0B7 351 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 ATG9BQ674R7 924 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 KIAA1324Q6UXG2 1013 aaKnown RBP12.45□□□□□ -0.42
CPNE1-201ENST00000317677 Q6ZS52 159 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 NOXA1Q86UR1 476 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 HID1Q8IV36 788 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 GALNT11Q8NCW6 608 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 SLC5A11Q8WWX8 675 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 METTL2AQ96IZ6 378 aaKnown RBP12.45□□□□□ -0.42
CPNE1-201ENST00000317677 TIMM29Q9BSF4 260 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 KCNH6Q9H252 994 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 IKZF5Q9H5V7 419 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 NARFLQ9H6Q4 476 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 SERHLQ9NQF3 203 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 VPS29Q9UBQ0 182 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 RAPGEFL1Q9UHV5 662 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 PNMA8BQ9ULN7 279 aaPredicted RBP12.45□□□□□ -0.42
CPNE1-201ENST00000317677 MMP17Q9ULZ9 603 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 SCML1Q9UN30 329 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 POLHQ9Y253 713 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 ZNF318Q5VUA4 2279 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 TRBV5-3A0A0A0MS03 114 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 PRAMEF33A0A0G2JMD5 474 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 A0A0X1KG70 313 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 A0A1W2PPV9 198 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 TCRBV21S2A2A0A5A6 115 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 PIPSLA2A3N6 862 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 C12orf71A8MTZ7 269 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 ARPC2O15144 300 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 MRPS14O60783 128 aaKnown RBP12.44□□□□□ -0.42
CPNE1-201ENST00000317677 SLITRK5O94991 958 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 LRATO95237 230 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 PRPS2P11908 318 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 ACPPP15309 386 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 OXTRP30559 389 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 HTR2BP41595 481 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 SLC9A3P48764 834 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 SEPHS1P49903 392 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 TPMTP51580 245 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 MTPNP58546 118 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 RPS13P62277 151 aaKnown RBP12.44□□□□□ -0.42
CPNE1-201ENST00000317677 CLCA4Q14CN2 919 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 PRAMEF14Q5SWL7 426 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 PRAMEF13Q5VWM6 474 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 TBPL2Q6SJ96 375 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 NXPE4Q6UWF7 544 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 ZNF767PQ75MW2 155 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 LAS2Q8IYD9 372 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 GLB1L3Q8NCI6 653 aaPredicted RBP12.44□□□□□ -0.42
CPNE1-201ENST00000317677 LHFPL5Q8TAF8 219 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 ASB12Q8WXK4 309 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 SGCDQ92629 289 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 RORBQ92753 470 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 LGALS12Q96DT0 336 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 SCARF2Q96GP6 870 aaPredicted RBP12.44□□□□□ -0.42
CPNE1-201ENST00000317677 C1QTNF7Q9BXJ2 289 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 LIN7BQ9HAP6 207 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 C2orf42Q9NWW7 574 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 MKLN1Q9UL63 735 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 DYRK1BQ9Y463 629 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 PCDHB3Q9Y5E6 796 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms