RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 HTR1EP28566 365 aa21.3■■□□□ 1
IRF3-201ENST00000309877 SOX11P35716 441 aa21.3■■□□□ 1
IRF3-201ENST00000309877 GRM7Q14831 915 aa21.3■■□□□ 1
IRF3-201ENST00000309877 TTC29Q8NA56 475 aaPredicted RBP21.3■■□□□ 1
IRF3-201ENST00000309877 TNIP2Q8NFZ5 429 aa21.3■■□□□ 1
IRF3-201ENST00000309877 OR2T12Q8NG77 320 aa21.3■■□□□ 1
IRF3-201ENST00000309877 OR9A4Q8NGU2 314 aa21.3■■□□□ 1
IRF3-201ENST00000309877 TRIM15Q9C019 465 aa21.3■■□□□ 1
IRF3-201ENST00000309877 RASSF4Q9H2L5 321 aa21.3■■□□□ 1
IRF3-201ENST00000309877 ZNF768Q9H5H4 540 aaKnown RBP21.3■■□□□ 1
IRF3-201ENST00000309877 DCLRE1BQ9H816 532 aa21.3■■□□□ 1
IRF3-201ENST00000309877 DNAAF2Q9NVR5 837 aaKnown RBP21.3■■□□□ 1
IRF3-201ENST00000309877 CES1P1Q9UKY3 287 aa21.3■■□□□ 1
IRF3-201ENST00000309877 CLCA2Q9UQC9 943 aa21.3■■□□□ 1
IRF3-201ENST00000309877 H0Y3Z8 333 aa21.29■■□□□ 1
IRF3-201ENST00000309877 DNAJB6O75190 326 aa21.29■■□□□ 1
IRF3-201ENST00000309877 FKBP6O75344 327 aa21.29■■□□□ 1
IRF3-201ENST00000309877 SOAT1P35610 550 aa21.29■■□□□ 1
IRF3-201ENST00000309877 FRKP42685 505 aaPredicted RBP21.29■■□□□ 1
IRF3-201ENST00000309877 GAB1Q13480 694 aa21.29■■□□□ 1
IRF3-201ENST00000309877 SPIDRQ14159 915 aa21.29■■□□□ 1
IRF3-201ENST00000309877 GPR19Q15760 415 aa21.29■■□□□ 1
IRF3-201ENST00000309877 SNCBQ16143 134 aa21.29■■□□□ 1
IRF3-201ENST00000309877 SPATA24Q86W54 205 aa21.29■■□□□ 1
IRF3-201ENST00000309877 OR4D9Q8NGE8 314 aa21.29■■□□□ 1
IRF3-201ENST00000309877 ZFP28Q8NHY6 868 aa21.29■■□□□ 1
IRF3-201ENST00000309877 NEUROD4Q9HD90 331 aa21.29■■□□□ 1
IRF3-201ENST00000309877 SLAMF7Q9NQ25 335 aa21.29■■□□□ 1
IRF3-201ENST00000309877 CORO2BQ9UQ03 480 aa21.29■■□□□ 1
IRF3-201ENST00000309877 PCDHB3Q9Y5E6 796 aa21.29■■□□□ 1
IRF3-201ENST00000309877 A0A0A6YYC8 382 aaPredicted RBP21.28■■□□□ 1
IRF3-201ENST00000309877 I3L1I5 382 aaPredicted RBP21.28■■□□□ 1
IRF3-201ENST00000309877 RDH16O75452 317 aa21.28■■□□□ 1
IRF3-201ENST00000309877 OR2B3O76000 313 aa21.28■■□□□ 1
IRF3-201ENST00000309877 OR4D2P58180 307 aa21.28■■□□□ 1
IRF3-201ENST00000309877 HSPB3Q12988 150 aa21.28■■□□□ 1
IRF3-201ENST00000309877 FAM53BQ14153 422 aa21.28■■□□□ 1
IRF3-201ENST00000309877 AASDHQ4L235 1098 aaPredicted RBP21.28■■□□□ 1
IRF3-201ENST00000309877 CYP2R1Q6VVX0 501 aa21.28■■□□□ 1
IRF3-201ENST00000309877 ZNF574Q6ZN55 896 aaPredicted RBP21.28■■□□□ 1
IRF3-201ENST00000309877 ZNF551Q7Z340 670 aaPredicted RBP21.28■■□□□ 1
IRF3-201ENST00000309877 PTRH1Q86Y79 214 aaKnown RBP21.28■■□□□ 1
IRF3-201ENST00000309877 CLEC4FQ8N1N0 589 aa21.28■■□□□ 1
IRF3-201ENST00000309877 OR5T3Q8NGG3 340 aa21.28■■□□□ 1
IRF3-201ENST00000309877 ZFP90Q8TF47 636 aa21.28■■□□□ 1
IRF3-201ENST00000309877 CNDP2Q96KP4 475 aaKnown RBP21.28■■□□□ 1
IRF3-201ENST00000309877 C10orf90Q96M02 699 aa21.28■■□□□ 1
IRF3-201ENST00000309877 SLC35A5Q9BS91 424 aa21.28■■□□□ 1
IRF3-201ENST00000309877 RPF2Q9H7B2 306 aaKnown RBP21.28■■□□□ 1
IRF3-201ENST00000309877 RNPEPL1Q9HAU8 725 aa21.28■■□□□ 1
IRF3-201ENST00000309877 ACTR3BQ9P1U1 418 aa21.28■■□□□ 1
IRF3-201ENST00000309877 USP22Q9UPT9 525 aa21.28■■□□□ 1
IRF3-201ENST00000309877 SNX13Q9Y5W8 968 aa21.28■■□□□ 1
IRF3-201ENST00000309877 SNX8Q9Y5X2 465 aa21.28■■□□□ 1
IRF3-201ENST00000309877 ZNF780BQ9Y6R6 833 aa21.28■■□□□ 1
IRF3-201ENST00000309877 FITM1A5D6W6 292 aa21.28■■□□□ 1
IRF3-201ENST00000309877 GSTA4O15217 222 aa21.28■■□□□ 1
IRF3-201ENST00000309877 GMNNO75496 209 aa21.28■■□□□ 1
IRF3-201ENST00000309877 LDOC1O95751 146 aaPredicted RBP21.28■■□□□ 1
IRF3-201ENST00000309877 NTRK1P04629 796 aa21.28■■□□□ 1
IRF3-201ENST00000309877 FOLR1P15328 257 aa21.28■■□□□ 1
IRF3-201ENST00000309877 UQCRC2P22695 453 aa21.28■■□□□ 1
IRF3-201ENST00000309877 CHI3L1P36222 383 aaPredicted RBP21.28■■□□□ 1
IRF3-201ENST00000309877 NCBP2P52298 156 aaKnown RBP eCLIP21.28■■□□□ 1
IRF3-201ENST00000309877 ABHD18Q0P651 414 aa21.28■■□□□ 1
IRF3-201ENST00000309877 MLC1Q15049 377 aa21.28■■□□□ 1
IRF3-201ENST00000309877 OR52E8Q6IFG1 317 aa21.28■■□□□ 1
IRF3-201ENST00000309877 AAGABQ6PD74 315 aa21.28■■□□□ 1
IRF3-201ENST00000309877 ANGPTL8Q6UXH0 198 aa21.28■■□□□ 1
IRF3-201ENST00000309877 TMPRSS9Q7Z410 1059 aa21.28■■□□□ 1
IRF3-201ENST00000309877 CA13Q8N1Q1 262 aa21.28■■□□□ 1
IRF3-201ENST00000309877 PNPT1Q8TCS8 783 aaKnown RBP21.28■■□□□ 1
IRF3-201ENST00000309877 RHBDD1Q8TEB9 315 aa21.28■■□□□ 1
IRF3-201ENST00000309877 RSRC1Q96IZ7 334 aaKnown RBP21.28■■□□□ 1
IRF3-201ENST00000309877 PRDM9Q9NQV7 894 aa21.28■■□□□ 1
IRF3-201ENST00000309877 CROCCQ5TZA2 2017 aa21.27■■□□□ 1
IRF3-201ENST00000309877 ARPC2O15144 300 aa21.27■■□□□ 1
IRF3-201ENST00000309877 FLRT2O43155 660 aa21.27■■□□□ 1
IRF3-201ENST00000309877 ZNF806P0C7X5 589 aa21.27■■□□□ 1
IRF3-201ENST00000309877 CSNK2A2P19784 350 aaPredicted RBP21.27■■□□□ 1
IRF3-201ENST00000309877 EMP3P54852 163 aa21.27■■□□□ 1
IRF3-201ENST00000309877 AP2B1P63010 937 aa21.27■■□□□ 1
IRF3-201ENST00000309877 RCN1Q15293 331 aa21.27■■□□□ 1
IRF3-201ENST00000309877 FAM214AQ32MH5 1076 aa21.27■■□□□ 1
IRF3-201ENST00000309877 DBX2Q6ZNG2 339 aa21.27■■□□□ 1
IRF3-201ENST00000309877 PROSER1Q86XN7 944 aa21.27■■□□□ 1
IRF3-201ENST00000309877 GPR135Q8IZ08 494 aa21.27■■□□□ 1
IRF3-201ENST00000309877 AMDHD1Q96NU7 426 aa21.27■■□□□ 1
IRF3-201ENST00000309877 CSF3RQ99062 836 aa21.27■■□□□ 1
IRF3-201ENST00000309877 GLIPR2Q9H4G4 154 aa21.27■■□□□ 1
IRF3-201ENST00000309877 CXorf36Q9H7Y0 433 aa21.27■■□□□ 1
IRF3-201ENST00000309877 FANCEQ9HB96 536 aa21.27■■□□□ 1
IRF3-201ENST00000309877 PDP2Q9P2J9 529 aa21.27■■□□□ 1
IRF3-201ENST00000309877 SERTAD3Q9UJW9 196 aa21.27■■□□□ 1
IRF3-201ENST00000309877 ELOVL7A1L3X0 281 aa21.26■□□□□ 0.99
IRF3-201ENST00000309877 MYO1GB0I1T2 1018 aa21.26■□□□□ 0.99
IRF3-201ENST00000309877 FAM220BPB1ANY3 271 aa21.26■□□□□ 0.99
IRF3-201ENST00000309877 FOXS1O43638 330 aa21.26■□□□□ 0.99
IRF3-201ENST00000309877 MED26O95402 600 aa21.26■□□□□ 0.99
IRF3-201ENST00000309877 ANKRD34CP0C6C1 535 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms