RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 OR10A6Q8NH74 314 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 GOT1L1Q8NHS2 421 aaPredicted RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 PYDC1Q8WXC3 89 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 ZCCHC14Q8WYQ9 949 aaKnown RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 EXOSC8Q96B26 276 aaKnown RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 ZDHHC12Q96GR4 267 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 TCTN2Q96GX1 697 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 ZNF764Q96H86 408 aaPredicted RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 ZNF583Q96ND8 569 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 GBP5Q96PP8 586 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 CCDC3Q9BQI4 270 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 NUDT22Q9BRQ3 303 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 THUMPD3Q9BV44 507 aaKnown RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 ARRDC1-AS1Q9H2J1 176 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 KAT8Q9H7Z6 458 aaKnown RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 COPS7BQ9H9Q2 264 aaPredicted RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 RNPEPL1Q9HAU8 725 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 ATAD3AQ9NVI7 634 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 GMEB2Q9UKD1 530 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 CES1P1Q9UKY3 287 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 MN1Q10571 1320 aaPredicted RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 A0A1W2PS29 197 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ZNF860A6NHJ4 632 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 GLOD5A6NK44 160 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ARPC2O15144 300 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ZSCAN9O15535 394 aaPredicted RBP6.58□□□□□ -1.36
PTCD2-201ENST00000308077 PROM1O43490 865 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 C1QL1O75973 258 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ANP32DO95626 131 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ABCB1P08183 1280 aaPredicted RBP6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ZCCHC18P0CG32 403 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ALPPL2P10696 532 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ALOX12P18054 663 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 FRKP42685 505 aaPredicted RBP6.58□□□□□ -1.36
PTCD2-201ENST00000308077 PCBP4P57723 403 aaKnown RBP6.58□□□□□ -1.36
PTCD2-201ENST00000308077 OLR1P78380 273 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 TRAP1Q12931 704 aaKnown RBP6.58□□□□□ -1.36
PTCD2-201ENST00000308077 KCNAB1Q14722 419 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 RCN1Q15293 331 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 FXNQ16595 210 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 PRTGQ2VWP7 1150 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 SPATS1Q496A3 300 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ZC3H12BQ5HYM0 836 aaKnown RBP6.58□□□□□ -1.36
PTCD2-201ENST00000308077 MANEAQ5SRI9 462 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 CYP2R1Q6VVX0 501 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ZNF621Q6ZSS3 439 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 USP53Q70EK8 1073 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ABHD13Q7L211 337 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 CALHM3Q86XJ0 350 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 PTRH1Q86Y79 214 aaKnown RBP6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ZNF655Q8N720 491 aaPredicted RBP6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ENDOVQ8N8Q3 282 aaKnown RBP6.58□□□□□ -1.36
PTCD2-201ENST00000308077 FAM181AQ8N9Y4 354 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 JADE3Q92613 823 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ZNF285Q96NJ3 590 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 PHF12Q96QT6 1004 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 SERINC2Q96SA4 455 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 CSF3RQ99062 836 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 CD180Q99467 661 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 KCTD14Q9BQ13 255 aaPredicted RBP6.58□□□□□ -1.36
PTCD2-201ENST00000308077 GTPBP2Q9BX10 602 aaKnown RBP6.58□□□□□ -1.36
PTCD2-201ENST00000308077 EPB41L1Q9H4G0 881 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 LYARQ9NX58 379 aaKnown RBP6.58□□□□□ -1.36
PTCD2-201ENST00000308077 KCMF1Q9P0J7 381 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 SEMA5BQ9P283 1151 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 WDR87Q6ZQQ6 2873 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 A0A1W2PRB8 838 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 CPED1A4D0V7 1026 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 EME2A4GXA9 379 aaPredicted RBP6.58□□□□□ -1.36
PTCD2-201ENST00000308077 URADA6NGE7 173 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 H3BNX3 289 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 CLIC1O00299 241 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 NVLO15381 856 aaKnown RBP6.58□□□□□ -1.36
PTCD2-201ENST00000308077 PDPK1O15530 556 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 GALR3O60755 368 aaPredicted RBP6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ZBTB11O95625 1053 aaPredicted RBP6.58□□□□□ -1.36
PTCD2-201ENST00000308077 DRD2P14416 443 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 PNLIPP16233 465 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 NCK1P16333 377 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ENGP17813 658 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 HTR1EP28566 365 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 SEPHS1P49903 392 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 LIM2P55344 173 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 MRPS22P82650 360 aaKnown RBP6.58□□□□□ -1.36
PTCD2-201ENST00000308077 DUSP2Q05923 314 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 BNIP2Q12982 314 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ZNF750Q32MQ0 723 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ZC3H14Q6PJT7 736 aaKnown RBP6.58□□□□□ -1.36
PTCD2-201ENST00000308077 RNF111Q6ZNA4 994 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 VPS37AQ8NEZ2 397 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 OR5T3Q8NGG3 340 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 PNPT1Q8TCS8 783 aaKnown RBP6.58□□□□□ -1.36
PTCD2-201ENST00000308077 SLC26A7Q8TE54 656 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ZFP90Q8TF47 636 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 NRG4Q8WWG1 115 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 STMN2Q93045 179 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 C10orf90Q96M02 699 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ECSITQ9BQ95 431 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 FAIM2Q9BWQ8 316 aa6.58□□□□□ -1.36
PTCD2-201ENST00000308077 ROGDIQ9GZN7 287 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms