RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 LDB3O75112 727 aa20.99■□□□□ 0.95
HOXD4-201ENST00000306324 AIFM1O95831 613 aa20.99■□□□□ 0.95
HOXD4-201ENST00000306324 EEF1A2Q05639 463 aaKnown RBP20.99■□□□□ 0.95
HOXD4-201ENST00000306324 KIAA0040Q15053 153 aa20.99■□□□□ 0.95
HOXD4-201ENST00000306324 ATP6AP1LQ52LC2 224 aa20.99■□□□□ 0.95
HOXD4-201ENST00000306324 RFTN2Q52LD8 501 aaPredicted RBP20.99■□□□□ 0.95
HOXD4-201ENST00000306324 NDUFAF5Q5TEU4 345 aa20.99■□□□□ 0.95
HOXD4-201ENST00000306324 NOXRED1Q6NXP6 359 aa20.99■□□□□ 0.95
HOXD4-201ENST00000306324 TMEM205Q6UW68 189 aa20.99■□□□□ 0.95
HOXD4-201ENST00000306324 RIPOR1Q6ZS17 1223 aa20.99■□□□□ 0.95
HOXD4-201ENST00000306324 SCUBE1Q8IWY4 988 aa20.99■□□□□ 0.95
HOXD4-201ENST00000306324 CDC26Q8NHZ8 85 aa20.99■□□□□ 0.95
HOXD4-201ENST00000306324 FAM76AQ8TAV0 307 aa20.99■□□□□ 0.95
HOXD4-201ENST00000306324 SNRNP27Q8WVK2 155 aaKnown RBP20.99■□□□□ 0.95
HOXD4-201ENST00000306324 TM4SF18Q96CE8 201 aa20.99■□□□□ 0.95
HOXD4-201ENST00000306324 METTL2AQ96IZ6 378 aaKnown RBP20.99■□□□□ 0.95
HOXD4-201ENST00000306324 PPP3R2Q96LZ3 170 aa20.99■□□□□ 0.95
HOXD4-201ENST00000306324 C7orf26Q96N11 449 aa20.99■□□□□ 0.95
HOXD4-201ENST00000306324 CATSPER2Q96P56 530 aa20.99■□□□□ 0.95
HOXD4-201ENST00000306324 SIRT5Q9NXA8 310 aa20.99■□□□□ 0.95
HOXD4-201ENST00000306324 C19orf25Q9UFG5 118 aaPredicted RBP20.99■□□□□ 0.95
HOXD4-201ENST00000306324 NBEAQ8NFP9 2946 aa20.98■□□□□ 0.95
HOXD4-201ENST00000306324 CTNSO60931 367 aa20.98■□□□□ 0.95
HOXD4-201ENST00000306324 TAS2R50P59544 299 aa20.98■□□□□ 0.95
HOXD4-201ENST00000306324 TRA2BP62995 288 aaKnown RBP20.98■□□□□ 0.95
HOXD4-201ENST00000306324 FAM47EQ6ZV65 393 aa20.98■□□□□ 0.95
HOXD4-201ENST00000306324 GPR155Q7Z3F1 870 aa20.98■□□□□ 0.95
HOXD4-201ENST00000306324 ANKRD37Q7Z713 158 aa20.98■□□□□ 0.95
HOXD4-201ENST00000306324 OR11G2Q8NGC1 345 aa20.98■□□□□ 0.95
HOXD4-201ENST00000306324 PIWIL2Q8TC59 973 aaKnown RBP20.98■□□□□ 0.95
HOXD4-201ENST00000306324 VPS50Q96JG6 964 aa20.98■□□□□ 0.95
HOXD4-201ENST00000306324 PRORYQ9H606 182 aa20.98■□□□□ 0.95
HOXD4-201ENST00000306324 DOCK10Q96BY6 2186 aa20.98■□□□□ 0.95
HOXD4-201ENST00000306324 ATMQ13315 3056 aa20.97■□□□□ 0.95
HOXD4-201ENST00000306324 IGHV3-20A0A0C4DH32 117 aa20.97■□□□□ 0.95
HOXD4-201ENST00000306324 ARGFXA6NJG6 315 aa20.97■□□□□ 0.95
HOXD4-201ENST00000306324 SLCO1B7G3V0H7 640 aa20.97■□□□□ 0.95
HOXD4-201ENST00000306324 PCDH17O14917 1159 aa20.97■□□□□ 0.95
HOXD4-201ENST00000306324 HDAC3O15379 428 aa20.97■□□□□ 0.95
HOXD4-201ENST00000306324 ID2Q02363 134 aa20.97■□□□□ 0.95
HOXD4-201ENST00000306324 ZNF763Q0D2J5 394 aa20.97■□□□□ 0.95
HOXD4-201ENST00000306324 STX4Q12846 297 aa20.97■□□□□ 0.95
HOXD4-201ENST00000306324 CPEB2Q7Z5Q1 589 aaKnown RBP20.97■□□□□ 0.95
HOXD4-201ENST00000306324 C16orf78Q8WTQ4 265 aa20.97■□□□□ 0.95
HOXD4-201ENST00000306324 UCN3Q969E3 161 aa20.97■□□□□ 0.95
HOXD4-201ENST00000306324 FAIM2Q9BWQ8 316 aa20.97■□□□□ 0.95
HOXD4-201ENST00000306324 VTI1BQ9UEU0 232 aa20.97■□□□□ 0.95
HOXD4-201ENST00000306324 FBXL4Q9UKA2 621 aa20.97■□□□□ 0.95
HOXD4-201ENST00000306324 DLGAP4Q9Y2H0 992 aa20.97■□□□□ 0.95
HOXD4-201ENST00000306324 IGKV3D-11A0A0A0MRZ8 115 aa20.96■□□□□ 0.95
HOXD4-201ENST00000306324 MYOCOSA0A1B0GUC4 107 aa20.96■□□□□ 0.95
HOXD4-201ENST00000306324 WASHC1A8K0Z3 465 aa20.96■□□□□ 0.95
HOXD4-201ENST00000306324 TGFBR3LH3BV60 316 aa20.96■□□□□ 0.95
HOXD4-201ENST00000306324 IL3P08700 152 aa20.96■□□□□ 0.95
HOXD4-201ENST00000306324 ALDH9A1P49189 494 aa20.96■□□□□ 0.95
HOXD4-201ENST00000306324 HK2P52789 917 aa20.96■□□□□ 0.95
HOXD4-201ENST00000306324 OR4D2P58180 307 aa20.96■□□□□ 0.95
HOXD4-201ENST00000306324 C6orf136Q5SQH8 315 aa20.96■□□□□ 0.95
HOXD4-201ENST00000306324 OR52E8Q6IFG1 317 aa20.96■□□□□ 0.95
HOXD4-201ENST00000306324 WDR75Q8IWA0 830 aaKnown RBP20.96■□□□□ 0.95
HOXD4-201ENST00000306324 OR4N5Q8IXE1 308 aa20.96■□□□□ 0.95
HOXD4-201ENST00000306324 MMP21Q8N119 569 aa20.96■□□□□ 0.95
HOXD4-201ENST00000306324 FNDC5Q8NAU1 212 aa20.96■□□□□ 0.95
HOXD4-201ENST00000306324 TANKQ92844 425 aa20.96■□□□□ 0.95
HOXD4-201ENST00000306324 TMED5Q9Y3A6 229 aa20.96■□□□□ 0.95
HOXD4-201ENST00000306324 LOC102723996A0A087X1L8 192 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 IGHV1-45A0A0A0MS14 117 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 TCRBV16S1A1N1A0A5B0 115 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 C1orf226A1L170 272 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 TRPC5OSA6NMA1 111 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 MASP2O00187 686 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 PGRMC2O15173 223 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 FGF17O60258 216 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 COX6A1P12074 109 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 GUCY1A3Q02108 690 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 FOLH1Q04609 750 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 ACTN3Q08043 901 aaPredicted RBP20.95■□□□□ 0.94
HOXD4-201ENST00000306324 CHAF1BQ13112 559 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 SFT2D3Q587I9 215 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 RGS9BPQ6ZS82 235 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 TMEM132CQ8N3T6 1108 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 ANKRD9Q96BM1 317 aaPredicted RBP20.95■□□□□ 0.94
HOXD4-201ENST00000306324 FER1L6-AS2Q96M78 137 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 C1orf50Q9BV19 199 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 ALOXE3Q9BYJ1 711 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 AKTIPQ9H8T0 292 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 MEAF6Q9HAF1 191 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 PCDHA9Q9Y5H5 950 aa20.95■□□□□ 0.94
HOXD4-201ENST00000306324 NSG1A0A0A6YYJ2 146 aa20.94■□□□□ 0.94
HOXD4-201ENST00000306324 TCP11X1B4DZS4 312 aa20.94■□□□□ 0.94
HOXD4-201ENST00000306324 SEC24DO94855 1032 aaPredicted RBP20.94■□□□□ 0.94
HOXD4-201ENST00000306324 PPP2R1BP30154 601 aa20.94■□□□□ 0.94
HOXD4-201ENST00000306324 RRADP55042 308 aa20.94■□□□□ 0.94
HOXD4-201ENST00000306324 DCAF10Q5QP82 559 aa20.94■□□□□ 0.94
HOXD4-201ENST00000306324 VWA5B1Q5TIE3 1220 aa20.94■□□□□ 0.94
HOXD4-201ENST00000306324 CPZQ66K79 652 aa20.94■□□□□ 0.94
HOXD4-201ENST00000306324 NDUFAF7Q7L592 441 aa20.94■□□□□ 0.94
HOXD4-201ENST00000306324 TMEM102Q8N9M5 508 aaPredicted RBP20.94■□□□□ 0.94
HOXD4-201ENST00000306324 DNAJB14Q8TBM8 379 aa20.94■□□□□ 0.94
HOXD4-201ENST00000306324 ZNF160Q9HCG1 818 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms