RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 GNB5O14775 395 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 CDK1P06493 297 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 PTPN2P17706 415 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 RGS6P49758 472 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 ZNF551Q7Z340 670 aaPredicted RBP12.72□□□□□ -0.37
DDX54-201ENST00000306014 MMAAQ8IVH4 418 aaKnown RBP12.72□□□□□ -0.37
DDX54-201ENST00000306014 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.72□□□□□ -0.37
DDX54-201ENST00000306014 Q8N402 240 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 IQCF1Q8N6M8 205 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 ZNF655Q8N720 491 aaPredicted RBP12.72□□□□□ -0.37
DDX54-201ENST00000306014 CIDECQ96AQ7 238 aaPredicted RBP12.72□□□□□ -0.37
DDX54-201ENST00000306014 MROQ9BYG7 248 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 BHLHE41Q9C0J9 482 aaPredicted RBP12.72□□□□□ -0.37
DDX54-201ENST00000306014 TP63Q9H3D4 680 aaPredicted RBP12.72□□□□□ -0.37
DDX54-201ENST00000306014 NMNAT1Q9HAN9 279 aaPredicted RBP12.72□□□□□ -0.37
DDX54-201ENST00000306014 IKZF2Q9UKS7 526 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 ERVW-1Q9UQF0 538 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 GABRR3A8MPY1 467 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 FAAHO00519 579 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 ARHGEF15O94989 841 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 ADAM15Q13444 863 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 PTGES3Q15185 160 aaKnown RBP12.72□□□□□ -0.37
DDX54-201ENST00000306014 UGT8Q16880 541 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 TMEM44Q2T9K0 475 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 SLC35F1Q5T1Q4 408 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 RTL4Q6ZR62 310 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 PARP16Q8N5Y8 322 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 CHST14Q8NCH0 376 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 NEIL3Q8TAT5 605 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 F2RL3Q96RI0 385 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 IGFLR1Q9H665 355 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 RDH14Q9HBH5 336 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 MRPS30Q9NP92 439 aaKnown RBP12.72□□□□□ -0.37
DDX54-201ENST00000306014 AKAP7Q9P0M2 348 aaPredicted RBP12.72□□□□□ -0.37
DDX54-201ENST00000306014 C5AR2Q9P296 337 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 INMT-MINDY4F8WBC2 141 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 GABARAPO95166 117 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 SOD2P04179 222 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 OMPP47874 163 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 ISL1P61371 349 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 MC1RQ01726 317 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 CBLBQ13191 982 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 CTU2Q2VPK5 515 aaKnown RBP12.72□□□□□ -0.37
DDX54-201ENST00000306014 BTBD16Q32M84 506 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 CATSPEREQ5SY80 951 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 IRAK1BP1Q5VVH5 260 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 C6orf120Q7Z4R8 191 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 NATD1Q8N6N6 113 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 LRRC20Q8TCA0 184 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 SMPDL3AQ92484 453 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 EPYCQ99645 322 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 CCDC32Q9BV29 185 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 STOX2Q9P2F5 926 aaPredicted RBP12.72□□□□□ -0.37
DDX54-201ENST00000306014 STUB1Q9UNE7 303 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 MAP2K3P46734 347 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 ST3GAL3Q11203 375 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 RPS26P11Q5JNZ5 115 aaPredicted RBP12.72□□□□□ -0.37
DDX54-201ENST00000306014 MEDAGQ5VYS4 303 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 SLC27A4Q6P1M0 643 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 SLC36A4Q6YBV0 504 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 FRRS1Q6ZNA5 592 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 TMEM145Q8NBT3 493 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 OR51G2Q8NGK0 314 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 TESCQ96BS2 214 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 TMEM19Q96HH6 336 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 RACGAP1Q9H0H5 632 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 BEX1Q9HBH7 125 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 NDOR1Q9UHB4 597 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 CDH7Q9ULB5 785 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 GRIP1Q9Y3R0 1128 aa12.72□□□□□ -0.37
DDX54-201ENST00000306014 TRAV6A0A075B6T7 132 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 LRRC72A6NJI9 287 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 HIST1H2ABP04908 130 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 HLA-EP13747 358 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 CMPK1P30085 196 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 SUOXP51687 545 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 LBX1P52954 281 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 HIST3H2AQ7L7L0 130 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 LINC00471Q8N535 108 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 LCN9Q8WX39 176 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 GGHQ92820 318 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 HIST1H2ACQ93077 130 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 NELL2Q99435 816 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 HDHD5Q9BXW7 423 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 MMP28Q9H239 520 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 ELAC1Q9H777 363 aaKnown RBP12.71□□□□□ -0.37
DDX54-201ENST00000306014 KCNK12Q9HB15 430 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 TDP1Q9NUW8 608 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 ELOVL2Q9NXB9 296 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 PHF11Q9UIL8 331 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 POU2F3Q9UKI9 436 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 A0A1W2PQL4 384 aaPredicted RBP12.71□□□□□ -0.37
DDX54-201ENST00000306014 ANHXE9PGG2 379 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 MRPS14O60783 128 aaKnown RBP12.71□□□□□ -0.37
DDX54-201ENST00000306014 CAPNS1P04632 268 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 MAT2AP31153 395 aaKnown RBP12.71□□□□□ -0.37
DDX54-201ENST00000306014 GSTM4Q03013 218 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 DUS1LQ6P1R4 473 aaKnown RBP12.71□□□□□ -0.37
DDX54-201ENST00000306014 ARMCX6Q7L4S7 300 aa12.71□□□□□ -0.37
DDX54-201ENST00000306014 LINGO2Q7L985 606 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms