RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 IFT80Q9P2H3 777 aaPredicted RBP10.04□□□□□ -0.8
CLP1-201ENST00000302731 PHF11Q9UIL8 331 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 CES1P1Q9UKY3 287 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 PSME2Q9UL46 239 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 ANGPT4Q9Y264 503 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 ATG4BQ9Y4P1 393 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 MDC1Q14676 2089 aaKnown RBP10.04□□□□□ -0.8
CLP1-201ENST00000302731 LILRA5A6NI73 299 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 AXIN1O15169 862 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 GCM2O75603 506 aaPredicted RBP10.04□□□□□ -0.8
CLP1-201ENST00000302731 AIFM1O95831 613 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 ALPLP05186 524 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 MYF6P23409 242 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 CERS1P27544 350 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 CXCL12P48061 93 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 CRYBA2P53672 197 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 RAB8AP61006 207 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 SELENOWP63302 87 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 BTN3A2P78410 334 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 PPP2R2BQ00005 443 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 CYBRD1Q53TN4 286 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 OR2T5Q6IEZ7 315 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 SHQ1Q6PI26 577 aaKnown RBP10.04□□□□□ -0.8
CLP1-201ENST00000302731 BHLHB9Q6PI77 547 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 ABHD13Q7L211 337 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 C6orf120Q7Z4R8 191 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 PATL1Q86TB9 770 aaKnown RBP10.04□□□□□ -0.8
CLP1-201ENST00000302731 C17orf82Q86X59 251 aaPredicted RBP10.04□□□□□ -0.8
CLP1-201ENST00000302731 DHRSXQ8N5I4 330 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 KCT2Q8NC54 265 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 OR2T29Q8NH02 315 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 OR5AK3PQ8NH89 298 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 C1orf216Q8TAB5 229 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 MAGEE2Q8TD90 523 aaPredicted RBP10.04□□□□□ -0.8
CLP1-201ENST00000302731 DNASE2BQ8WZ79 361 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 LZICQ8WZA0 190 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 MAL2Q969L2 176 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 RERGQ96A58 199 aaPredicted RBP10.04□□□□□ -0.8
CLP1-201ENST00000302731 NRBF2Q96F24 287 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 RBM4BQ9BQ04 359 aaKnown RBP10.04□□□□□ -0.8
CLP1-201ENST00000302731 MACROD1Q9BQ69 325 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 RBM4Q9BWF3 364 aaKnown RBP10.04□□□□□ -0.8
CLP1-201ENST00000302731 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.04□□□□□ -0.8
CLP1-201ENST00000302731 GLIPR2Q9H4G4 154 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 A4GALTQ9NPC4 353 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 PNPLA3Q9NST1 481 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 GIMAP4Q9NUV9 329 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 ACSL6Q9UKU0 697 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 POMT2Q9UKY4 750 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 BAG5Q9UL15 447 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 PADI4Q9UM07 663 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 ENTPD4Q9Y227 616 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 PADI2Q9Y2J8 665 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 MAP4K5Q9Y4K4 846 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 SNX8Q9Y5X2 465 aa10.04□□□□□ -0.8
CLP1-201ENST00000302731 UNC80Q8N2C7 3258 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 A0A0J9YVX5 310 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 ZNF888P0CJ79 500 aaPredicted RBP10.03□□□□□ -0.8
CLP1-201ENST00000302731 CSNK2A2P19784 350 aaPredicted RBP10.03□□□□□ -0.8
CLP1-201ENST00000302731 CAPGP40121 348 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 DCTP40126 519 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 BUD31P41223 144 aaPredicted RBP10.03□□□□□ -0.8
CLP1-201ENST00000302731 PXNP49023 591 aaPredicted RBP10.03□□□□□ -0.8
CLP1-201ENST00000302731 CCT3P49368 545 aaKnown RBP10.03□□□□□ -0.8
CLP1-201ENST00000302731 CDK9P50750 372 aaKnown RBP10.03□□□□□ -0.8
CLP1-201ENST00000302731 ANXA11P50995 505 aaKnown RBP10.03□□□□□ -0.8
CLP1-201ENST00000302731 ARHGDIAP52565 204 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 ITGA1P56199 1179 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 NXPH1P58417 271 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 HNRNPKP61978 463 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLP1-201ENST00000302731 KCNJ10P78508 379 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 ADARB1P78563 741 aaKnown RBP10.03□□□□□ -0.8
CLP1-201ENST00000302731 MLLT1Q03111 559 aaPredicted RBP10.03□□□□□ -0.8
CLP1-201ENST00000302731 HSPB3Q12988 150 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 C1orf61Q13536 156 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 SPIDRQ14159 915 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 RFX4Q33E94 735 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 OR52E8Q6IFG1 317 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 REEP3Q6NUK4 255 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 ARMC6Q6NXE6 501 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 TBPL2Q6SJ96 375 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 CEACAM20Q6UY09 585 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 STK32CQ86UX6 486 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 ZC3H7AQ8IWR0 971 aaKnown RBP10.03□□□□□ -0.8
CLP1-201ENST00000302731 BBS4Q96RK4 519 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 GABARAPL1Q9H0R8 117 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 SEMA6CQ9H3T2 930 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 CAAP1Q9H8G2 361 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 EVA1BQ9NVM1 165 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 C5AR2Q9P296 337 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 FBXW2Q9UKT8 454 aa10.03□□□□□ -0.8
CLP1-201ENST00000302731 CCDC163A0A0D9SF12 145 aa10.02□□□□□ -0.81
CLP1-201ENST00000302731 TMEM229AB2RXF0 380 aa10.02□□□□□ -0.81
CLP1-201ENST00000302731 B4DGG1 531 aa10.02□□□□□ -0.81
CLP1-201ENST00000302731 H0YGG7 62 aa10.02□□□□□ -0.81
CLP1-201ENST00000302731 K7ESF4 209 aa10.02□□□□□ -0.81
CLP1-201ENST00000302731 PGRMC2O15173 223 aa10.02□□□□□ -0.81
CLP1-201ENST00000302731 B3GALT2O43825 422 aa10.02□□□□□ -0.81
CLP1-201ENST00000302731 E2F6O75461 281 aa10.02□□□□□ -0.81
CLP1-201ENST00000302731 PDE9AO76083 593 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms