RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 H2AFXP16104 143 aaPredicted RBP16.97■□□□□ 0.31
TMEM88-201ENST00000301599 PIK3CGP48736 1102 aa16.97■□□□□ 0.31
TMEM88-201ENST00000301599 MEOX1P50221 254 aa16.97■□□□□ 0.31
TMEM88-201ENST00000301599 RAP1GDS1P52306 607 aa16.97■□□□□ 0.31
TMEM88-201ENST00000301599 ARFIP1P53367 373 aa16.97■□□□□ 0.31
TMEM88-201ENST00000301599 PHEXP78562 749 aa16.97■□□□□ 0.31
TMEM88-201ENST00000301599 SLAMF1Q13291 335 aa16.97■□□□□ 0.31
TMEM88-201ENST00000301599 DDX39BQ13838 428 aaKnown RBP16.97■□□□□ 0.31
TMEM88-201ENST00000301599 RNFT1Q5M7Z0 435 aa16.97■□□□□ 0.31
TMEM88-201ENST00000301599 METTL2BQ6P1Q9 378 aaKnown RBP16.97■□□□□ 0.31
TMEM88-201ENST00000301599 XKRXQ6PP77 449 aa16.97■□□□□ 0.31
TMEM88-201ENST00000301599 BNC2Q6ZN30 1099 aaPredicted RBP16.97■□□□□ 0.31
TMEM88-201ENST00000301599 GPALPP1Q8IXQ4 340 aa16.97■□□□□ 0.31
TMEM88-201ENST00000301599 IFT81Q8WYA0 676 aa16.97■□□□□ 0.31
TMEM88-201ENST00000301599 REPS1Q96D71 796 aa16.97■□□□□ 0.31
TMEM88-201ENST00000301599 GPR78Q96P69 363 aa16.97■□□□□ 0.31
TMEM88-201ENST00000301599 FUT8Q9BYC5 575 aa16.97■□□□□ 0.31
TMEM88-201ENST00000301599 VPS11Q9H270 941 aa16.97■□□□□ 0.31
TMEM88-201ENST00000301599 RUBCNLQ9H714 662 aa16.97■□□□□ 0.31
TMEM88-201ENST00000301599 IPPKQ9H8X2 491 aa16.97■□□□□ 0.31
TMEM88-201ENST00000301599 MYOTQ9UBF9 498 aa16.97■□□□□ 0.31
TMEM88-201ENST00000301599 DMGDHQ9UI17 866 aaKnown RBP16.97■□□□□ 0.31
TMEM88-201ENST00000301599 KLF2Q9Y5W3 355 aaPredicted RBP16.97■□□□□ 0.31
TMEM88-201ENST00000301599 IKBKGQ9Y6K9 419 aa16.97■□□□□ 0.31
TMEM88-201ENST00000301599 TMEM200CA6NKL6 621 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 C17orf105B2RV13 164 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 H0YIV9 168 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 PRKNO60260 465 aaPredicted RBP16.96■□□□□ 0.31
TMEM88-201ENST00000301599 ERLIN1O75477 346 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 OR2J2O76002 312 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 INHBAP08476 426 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 RBP1P09455 135 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 CTAGE8P0CG41 777 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 ABOP16442 354 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 TLX1P31314 330 aaPredicted RBP16.96■□□□□ 0.31
TMEM88-201ENST00000301599 SMSP52788 366 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 GTF2H2Q13888 395 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 GTF2H2CQ6P1K8 395 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 MDGA2Q7Z553 956 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 GPR180Q86V85 440 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 CTAGE4Q8IX94 777 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 OR5L2Q8NGL0 311 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 OR8K3Q8NH51 312 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 TANKQ92844 425 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 ANKRD9Q96BM1 317 aaPredicted RBP16.96■□□□□ 0.31
TMEM88-201ENST00000301599 RBM18Q96H35 190 aaKnown RBP16.96■□□□□ 0.31
TMEM88-201ENST00000301599 MTERF1Q99551 399 aaKnown RBP16.96■□□□□ 0.31
TMEM88-201ENST00000301599 OR8D2Q9GZM6 311 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 RPF2Q9H7B2 306 aaKnown RBP16.96■□□□□ 0.31
TMEM88-201ENST00000301599 LIN28AQ9H9Z2 209 aaKnown RBP16.96■□□□□ 0.31
TMEM88-201ENST00000301599 PSD3Q9NYI0 1048 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 CPSF2Q9P2I0 782 aaKnown RBP16.96■□□□□ 0.31
TMEM88-201ENST00000301599 TINAGQ9UJW2 476 aa16.96■□□□□ 0.31
TMEM88-201ENST00000301599 A8MVJ9 347 aa16.95■□□□□ 0.3
TMEM88-201ENST00000301599 COX7A2P14406 83 aa16.95■□□□□ 0.3
TMEM88-201ENST00000301599 SERPINB9P50453 376 aa16.95■□□□□ 0.3
TMEM88-201ENST00000301599 ERCC6LQ2NKX8 1250 aa16.95■□□□□ 0.3
TMEM88-201ENST00000301599 GLE1Q53GS7 698 aaKnown RBP16.95■□□□□ 0.3
TMEM88-201ENST00000301599 IL20RBQ6UXL0 311 aa16.95■□□□□ 0.3
TMEM88-201ENST00000301599 ZCCHC7Q8N3Z6 543 aaKnown RBP16.95■□□□□ 0.3
TMEM88-201ENST00000301599 RNF175Q8N4F7 328 aa16.95■□□□□ 0.3
TMEM88-201ENST00000301599 C16orf52Q8NHV5 167 aa16.95■□□□□ 0.3
TMEM88-201ENST00000301599 SLC44A1Q8WWI5 657 aa16.95■□□□□ 0.3
TMEM88-201ENST00000301599 ASB15Q8WXK1 588 aa16.95■□□□□ 0.3
TMEM88-201ENST00000301599 SORBS1Q9BX66 1292 aaKnown RBP16.95■□□□□ 0.3
TMEM88-201ENST00000301599 DMRT3Q9NQL9 472 aa16.95■□□□□ 0.3
TMEM88-201ENST00000301599 HPF1Q9NWY4 346 aa16.95■□□□□ 0.3
TMEM88-201ENST00000301599 PHF11Q9UIL8 331 aa16.95■□□□□ 0.3
TMEM88-201ENST00000301599 TMCO1Q9UM00 188 aa16.95■□□□□ 0.3
TMEM88-201ENST00000301599 LRRC14BA6NHZ5 514 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 WWP2O00308 870 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 PRRG2O14669 202 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 TFECO14948 347 aaPredicted RBP16.94■□□□□ 0.3
TMEM88-201ENST00000301599 DYRK3O43781 588 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 KRT38O76015 456 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 CLDN9O95484 217 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 ACSL3O95573 720 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 AGAP20933 346 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 RPS13P62277 151 aaKnown RBP16.94■□□□□ 0.3
TMEM88-201ENST00000301599 RNF4P78317 190 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 IGLV3-21P80748 117 aaPredicted RBP16.94■□□□□ 0.3
TMEM88-201ENST00000301599 ID2Q02363 134 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 CUL3Q13618 768 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 CPSF6Q16630 551 aaKnown RBP eCLIP16.94■□□□□ 0.3
TMEM88-201ENST00000301599 C16orf47Q6ZP98 133 aaPredicted RBP16.94■□□□□ 0.3
TMEM88-201ENST00000301599 TAOK1Q7L7X3 1001 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 GOLGA7Q7Z5G4 137 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 OR4N5Q8IXE1 308 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 PLD6Q8N2A8 252 aaKnown RBP16.94■□□□□ 0.3
TMEM88-201ENST00000301599 L3MBTL4Q8NA19 623 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 ZFP62Q8NB50 900 aaPredicted RBP16.94■□□□□ 0.3
TMEM88-201ENST00000301599 SLC2A12Q8TD20 617 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 ATP6V1E2Q96A05 226 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 MARVELD3Q96A59 401 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 DGAT2Q96PD7 388 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 RASL10BQ96S79 203 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 FMO2Q99518 471 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 CDC42EP4Q9H3Q1 356 aaKnown RBP16.94■□□□□ 0.3
TMEM88-201ENST00000301599 CHST11Q9NPF2 352 aa16.94■□□□□ 0.3
TMEM88-201ENST00000301599 COPS7AQ9UBW8 275 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms