RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 OR5AR1Q8NGP9 310 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 MUL1Q969V5 352 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 CSF3RQ99062 836 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 SLC12A9Q9BXP2 914 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 SRRDQ9UH36 339 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 DPP7Q9UHL4 492 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 SARDHQ9UL12 918 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 OR10H1Q9Y4A9 318 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 FER1L6Q2WGJ9 1857 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 A0A1W2PQ72 361 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 FAM183AA6NL82 134 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 NOTOA8MTQ0 251 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 KCNK5O95279 499 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 VIPR1P32241 457 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 GPR4P46093 362 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 DCDC1P59894 354 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 TUBA1BP68363 451 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 TGM3Q08188 693 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 E2F2Q14209 437 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 INAVAQ3KP66 663 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 ZNF311Q5JNZ3 666 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 FAM46CQ5VWP2 391 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 FCRLBQ6BAA4 426 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 TUBA1AQ71U36 451 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 OR8H3Q8N146 312 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 C10orf111Q8N326 155 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 PARP16Q8N5Y8 322 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 CHPT1Q8WUD6 406 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 AP3S1Q92572 193 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 UFD1Q92890 307 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 TRIM63Q969Q1 353 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 NUS1Q96E22 293 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 CAPNS2Q96L46 248 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 PIP5K1AQ99755 562 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 ACTL8Q9H568 366 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 IL36AQ9UHA7 158 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 ZNF510Q9Y2H8 683 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 IRAK3Q9Y616 596 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 A0A075B6Q4 140 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 A0A1W2PQL4 384 aaPredicted RBP12.72□□□□□ -0.37
CASC4-201ENST00000299957 RLN1P04808 185 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 SDC2P34741 201 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 DBPQ10586 325 aaPredicted RBP12.72□□□□□ -0.37
CASC4-201ENST00000299957 ELMSAN1Q6PJG2 1045 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 METTL3Q86U44 580 aaKnown RBP12.72□□□□□ -0.37
CASC4-201ENST00000299957 OOSP2Q86WS3 158 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 OR4E2Q8NGC2 313 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 SPATA5L1Q9BVQ7 753 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 SLC7A5P2Q9GIP4 190 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 ZFR2Q9UPR6 939 aaKnown RBP12.72□□□□□ -0.37
CASC4-201ENST00000299957 SLC45A1Q9Y2W3 748 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 OR1A2Q9Y585 309 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 CSF2RAP15509 400 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 KCNN1Q92952 543 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 PPP1R16AQ96I34 528 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 ZSCAN5AQ9BUG6 496 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 MED28Q9H204 178 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 SMURF1Q9HCE7 757 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 CLEC2DQ9UHP7 191 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 SSC5DA1L4H1 1573 aa12.72□□□□□ -0.37
CASC4-201ENST00000299957 TPRP12270 2363 aaKnown RBP12.71□□□□□ -0.37
CASC4-201ENST00000299957 WASHC1A8K0Z3 465 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 J3QLW9 94 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 ZNF19P17023 458 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 MYL9P24844 172 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 CRISP3P54108 245 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 PPP2R2BQ00005 443 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 NOGQ13253 232 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 LRRC32Q14392 662 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 THOC7Q6I9Y2 204 aaKnown RBP12.71□□□□□ -0.37
CASC4-201ENST00000299957 SLC30A6Q6NXT4 461 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 MZT2AQ6P582 158 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 WASH2PQ6VEQ5 465 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 OR9A1PQ8NGU1 263 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 OR8K5Q8NH50 307 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 DNAJB8Q8NHS0 232 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 BBS10Q8TAM1 723 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.71□□□□□ -0.371e-6■■■■■ 29.8
CASC4-201ENST00000299957 ZNF300Q96RE9 604 aaPredicted RBP12.71□□□□□ -0.37
CASC4-201ENST00000299957 PCP4L1A6NKN8 68 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 CACNG3O60359 315 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 PRKRAO75569 313 aaKnown RBP12.71□□□□□ -0.37
CASC4-201ENST00000299957 UPK1BO75841 260 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 RASGRP1O95267 797 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 C1GALT1C1LP0DN25 315 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 CD72P21854 359 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 SDHBP21912 280 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 LHCGRP22888 699 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 ACVR1BP36896 505 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 RGS6P49758 472 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 SELENOWP63302 87 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 RBM45Q8IUH3 476 aaKnown RBP12.71□□□□□ -0.37
CASC4-201ENST00000299957 METTL4Q8N3J2 472 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 RHOXF1Q8NHV9 184 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 IRF7Q92985 503 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 TMEM80Q96HE8 168 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 C3orf14Q9HBI5 128 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 SPACA6W5XKT8 324 aa12.71□□□□□ -0.37
CASC4-201ENST00000299957 DAPL1A0PJW8 107 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 ZNF701M0R085 212 aaPredicted RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms