RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 VAMP2P63027 116 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 CBFBQ13951 182 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 LRRC32Q14392 662 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 ANKRD54Q6NXT1 300 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 C1orf74Q96LT6 269 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 CACNG6Q9BXT2 260 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 ANKMY1Q9P2S6 941 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 TAC3Q9UHF0 121 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 INTS6Q9UL03 887 aaKnown RBP15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 MAFFQ9ULX9 164 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 GOLGA4Q13439 2230 aaKnown RBP15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 LOC100509620A0A075B734 347 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 MITFO75030 526 aaPredicted RBP15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 PDYNP01213 254 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 FOSL2P15408 326 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 KCNQ1P51787 676 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 ILF3Q12906 894 aaKnown RBP eCLIP15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 SNAP47Q5SQN1 464 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 GDPGP1Q6ZNW5 385 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 PNLDC1Q8NA58 520 aaKnown RBP15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 SETD6Q8TBK2 473 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 FRS2Q8WU20 508 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 NUS1Q96E22 293 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 ZNF700Q9H0M5 742 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 RNF121Q9H920 327 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 RABL2AQ9UBK7 228 aaPredicted RBP15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 RABL2BQ9UNT1 228 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 RBBP9O75884 186 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 RETP07949 1114 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 IL12BP29460 328 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 CYP27C1Q4G0S4 372 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 NOXA1Q86UR1 476 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 BBS10Q8TAM1 723 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 ZFP90Q8TF47 636 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 GAL3ST4Q96RP7 486 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 TMEM45AQ9NWC5 275 aa15.83■□□□□ 0.12
SNAPC4-201ENST00000298532 ZCWPW2A0A1B0GU75 182 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 LCKP06239 509 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 ZNF30P17039 623 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 LASP1Q14847 261 aaKnown RBP15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 MINDY4Q4G0A6 757 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 ADGRG5Q8IZF4 528 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 ZNF778Q96MU6 729 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 OR4K3Q96R72 315 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 MCHR1Q99705 422 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 ATPIF1Q9UII2 106 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 PCDHGB2Q9Y5G2 931 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 MYH2Q9UKX2 1941 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 TCRBV3S1A0A5B6 114 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 SOD2P04179 222 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 CA5AP35218 305 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 PDGFRLQ15198 375 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 PCBP2Q15366 365 aaKnown RBP eCLIP15.82■□□□□ 0.124e-7■■■■■ 34.3
SNAPC4-201ENST00000298532 UBE2UQ5VVX9 321 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 PRSS55Q6UWB4 352 aaPredicted RBP15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 CEACAM19Q7Z692 300 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 FOXRED2Q8IWF2 684 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 PDZD9Q8IXQ8 264 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 ZNF101Q8IZC7 436 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 CHDHQ8NE62 594 aaPredicted RBP15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 ASB15Q8WXK1 588 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 CCDC120Q96HB5 630 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 AGAP5A6NIR3 686 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 F5H0A9 414 aaPredicted RBP15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 NARSO43776 548 aaKnown RBP15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 ATE1O95260 518 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 HSD3B1P14060 373 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 HSD3B2P26439 372 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 HK3P52790 923 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 MAD2L1BPQ15013 274 aaPredicted RBP15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 PLEKHS1Q5SXH7 462 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 SLC35F1Q5T1Q4 408 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 TSPAN33Q86UF1 283 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 LHFPL3Q86UP9 236 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 POGLUT1Q8NBL1 392 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 SLC22A18Q96BI1 424 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 SYT11Q9BT88 431 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 YIPF1Q9Y548 306 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 COL22A1Q8NFW1 1626 aaPredicted RBP15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 KMOO15229 486 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 ZNF865P0CJ78 1059 aaPredicted RBP15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 AIMP2Q13155 320 aaKnown RBP15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 KEAP1Q14145 624 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 LRRC69Q6ZNQ3 347 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 KCTD9Q7L273 389 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 CELF5Q8N6W0 485 aaKnown RBP15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 OR14C36Q8NHC7 312 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 TMEM125Q96AQ2 219 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 SLC30A3Q99726 388 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 CRTAC1Q9NQ79 661 aa15.82■□□□□ 0.12
SNAPC4-201ENST00000298532 RGPD2P0DJD1 1756 aa15.81■□□□□ 0.12
SNAPC4-201ENST00000298532 PIRO00625 290 aa15.81■□□□□ 0.12
SNAPC4-201ENST00000298532 CREBL2O60519 120 aaPredicted RBP15.81■□□□□ 0.12
SNAPC4-201ENST00000298532 RPL17P18621 184 aaKnown RBP15.81■□□□□ 0.12
SNAPC4-201ENST00000298532 VIPR1P32241 457 aa15.81■□□□□ 0.12
SNAPC4-201ENST00000298532 GFOD2Q3B7J2 385 aa15.81■□□□□ 0.12
SNAPC4-201ENST00000298532 ISCA2Q86U28 154 aa15.81■□□□□ 0.12
SNAPC4-201ENST00000298532 COMMD7Q86VX2 200 aa15.81■□□□□ 0.12
SNAPC4-201ENST00000298532 SLC22A15Q8IZD6 547 aa15.81■□□□□ 0.12
SNAPC4-201ENST00000298532 HS3ST5Q8IZT8 346 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms