RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 LRRTM4Q86VH4 590 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 KRT73Q86Y46 540 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 DNAJC5GQ8N7S2 189 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 AQP11Q8NBQ7 271 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 HERVK_113Q902F9 699 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 RGMAQ96B86 450 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 SAMD11Q96NU1 681 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 NIPSNAP1Q9BPW8 284 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 RHNO1Q9BSD3 238 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 TMEM106CQ9BVX2 250 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 UCK2Q9BZX2 261 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 FZD3Q9NPG1 666 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 DEC1Q9P2X7 70 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 ACAD8Q9UKU7 415 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 ACSL5Q9ULC5 683 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 PRAMEF33A0A0G2JMD5 474 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 PLPP1O14494 284 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 PRAMEF10O60809 474 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 PTTG1O95997 202 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 CEBPBP17676 345 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 GADD45AP24522 165 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 CTNNB1P35222 781 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 BSGP35613 385 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 SLC19A1P41440 591 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 SLC15A1P46059 708 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 PSMD7P51665 324 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 MANFP55145 182 aaKnown RBP9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 PCBP4P57723 403 aaKnown RBP9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 COPZ1P61923 177 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 MC1RQ01726 317 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 COX10Q12887 443 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 CBX3Q13185 183 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 AGERQ15109 404 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 PTGES3Q15185 160 aaKnown RBP9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 SLC25A30Q5SVS4 291 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 PRAMEF8Q5VWM4 474 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 PRAMEF7Q5VXH5 474 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 SLX4IPQ5VYV7 408 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 PPP2R2DQ66LE6 453 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 KIAA1211LQ6NV74 962 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 CD300LDQ6UXZ3 194 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 UTP15Q8TED0 518 aaKnown RBP9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 TFGQ92734 400 aaPredicted RBP9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 MOAP1Q96BY2 351 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 CXorf36Q9H7Y0 433 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 NMNAT1Q9HAN9 279 aaPredicted RBP9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 TMEM184CQ9NVA4 438 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 TRNAU1APQ9NX07 287 aaKnown RBP9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 MS4A12Q9NXJ0 267 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 OBP2AQ9NY56 170 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 AASSQ9UDR5 926 aa9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 MRPS23Q9Y3D9 190 aaKnown RBP9.53□□□□□ -0.88
TNFRSF11B-201ENST00000297350 IRGMA1A4Y4 181 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 PRAMEF25A6NGN4 478 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 BOLA2-SMG1P6H3BVE0 249 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 TOR1BO14657 336 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 KCNJ13O60928 360 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 GUCY1B2O75343 617 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 SH3BGRLO75368 114 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 CLEC3AO75596 197 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 MED26O95402 600 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 ENDOUP21128 410 aaKnown RBP9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 CHMP24386 653 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 PPP2R1BP30154 601 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 OR1E2P47887 323 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 UGT2B15P54855 530 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 LSM3P62310 102 aaKnown RBP9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 DMPKQ09013 629 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 PDGFRLQ15198 375 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 ARMCX4Q5H9R4 360 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 TMEM240Q5SV17 173 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 TMEM236Q5W0B7 351 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 METRNLQ641Q3 311 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 BHLHB9Q6PI77 547 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 KLHL17Q6TDP4 642 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 TMEM64Q6YI46 380 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 PTCHD4Q6ZW05 846 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 GJD3Q8N144 294 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 B3GNT7Q8NFL0 401 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 SPPL3Q8TCT6 385 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 SFXN5Q8TD22 340 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 UBE2FQ969M7 185 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 TM4SF18Q96CE8 201 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 ZNF354BQ96LW1 612 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 ZSWIM3Q96MP5 696 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 FAIM2Q9BWQ8 316 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 ZNF717Q9BY31 904 aaPredicted RBP9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 TMEM245Q9H330 911 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 MTG2Q9H4K7 406 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 RLIMQ9NVW2 624 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 GPR83Q9NYM4 423 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 CRNNQ9UBG3 495 aaPredicted RBP9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 P2RX2Q9UBL9 471 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 ACSL6Q9UKU0 697 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 BRCA2P51587 3418 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 A0A075B6Q4 140 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 ZBBXA8MT70 800 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 C5orf67F2Z3F1 127 aa9.52□□□□□ -0.89
TNFRSF11B-201ENST00000297350 LOC110117498-PIK3R3F6TDL0 507 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms