RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ANKRD46Q86W74 232 aa15.99■□□□□ 0.15
CPSF4-201ENST00000292476 C10orf111Q8N326 155 aa15.99■□□□□ 0.15
CPSF4-201ENST00000292476 LMNTD1Q8N9Z9 388 aa15.99■□□□□ 0.15
CPSF4-201ENST00000292476 PIK3C3Q8NEB9 887 aa15.99■□□□□ 0.15
CPSF4-201ENST00000292476 OR4E2Q8NGC2 313 aa15.99■□□□□ 0.15
CPSF4-201ENST00000292476 FNDC8Q8TC99 324 aa15.99■□□□□ 0.15
CPSF4-201ENST00000292476 PRAP1Q96NZ9 151 aa15.99■□□□□ 0.15
CPSF4-201ENST00000292476 QRFPRQ96P65 431 aa15.99■□□□□ 0.15
CPSF4-201ENST00000292476 TBCCD1Q9NVR7 557 aa15.99■□□□□ 0.15
CPSF4-201ENST00000292476 CPNE7Q9UBL6 633 aa15.99■□□□□ 0.15
CPSF4-201ENST00000292476 UTS2RQ9UKP6 389 aa15.99■□□□□ 0.15
CPSF4-201ENST00000292476 PLXND1Q9Y4D7 1925 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 ABCA7Q8IZY2 2146 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 ISM1B1AKI9 464 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 SCAMP2O15127 329 aaKnown RBP15.98■□□□□ 0.15
CPSF4-201ENST00000292476 KCNK5O95279 499 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 EML2O95834 649 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 GSNP06396 782 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 CHRM5P08912 532 aaPredicted RBP15.98■□□□□ 0.15
CPSF4-201ENST00000292476 COX7A2P14406 83 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 IL7RP16871 459 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 ENGP17813 658 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 BCKDHBP21953 392 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 RPL3P39023 403 aaKnown RBP15.98■□□□□ 0.15
CPSF4-201ENST00000292476 AFF3P51826 1226 aaKnown RBP15.98■□□□□ 0.15
CPSF4-201ENST00000292476 C21orf59P57076 290 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 HNRNPKP61978 463 aaKnown RBP eCLIP15.98■□□□□ 0.153e-6■■■■□ 21
CPSF4-201ENST00000292476 TEAD4Q15561 434 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 MOGQ16653 247 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 CTU2Q2VPK5 515 aaKnown RBP15.98■□□□□ 0.15
CPSF4-201ENST00000292476 ZNF829Q3KNS6 432 aaPredicted RBP15.98■□□□□ 0.15
CPSF4-201ENST00000292476 PRRT3Q5FWE3 981 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 CBLL1Q75N03 491 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 ZNF551Q7Z340 670 aaPredicted RBP15.98■□□□□ 0.15
CPSF4-201ENST00000292476 ADCK2Q7Z695 626 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 DEFB119Q8N690 84 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 VPS37AQ8NEZ2 397 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 OR2L3Q8NG85 312 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 TBC1D15Q8TC07 691 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 EGLN2Q96KS0 407 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 DCUN1D5Q9BTE7 237 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 SARGQ9BW04 601 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 ASPSCR1Q9BZE9 553 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 PSME2Q9UL46 239 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 DOLKQ9UPQ8 538 aa15.98■□□□□ 0.15
CPSF4-201ENST00000292476 WBP11Q9Y2W2 641 aaKnown RBP15.98■□□□□ 0.15
CPSF4-201ENST00000292476 A0A1W2PPW3 197 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 FABP3P05413 133 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 INHBBP09529 407 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 DDX5P17844 614 aaKnown RBP15.97■□□□□ 0.15
CPSF4-201ENST00000292476 MATN1P21941 496 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 TIA1P31483 386 aaKnown RBP eCLIP15.97■□□□□ 0.15
CPSF4-201ENST00000292476 KDELR2P33947 212 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 HPCAL1P37235 193 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 GSTM5P46439 218 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 CSNK1G2P78368 415 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 MEF2AQ02078 507 aaPredicted RBP15.97■□□□□ 0.15
CPSF4-201ENST00000292476 MEP1AQ16819 746 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 KDM4DQ6B0I6 523 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 ZCCHC8Q6NZY4 707 aaKnown RBP15.97■□□□□ 0.15
CPSF4-201ENST00000292476 LINC00299Q6ZSB3 139 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 PAGE2Q7Z2X7 111 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 HS3ST5Q8IZT8 346 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 C1orf52Q8N6N3 182 aaKnown RBP15.97■□□□□ 0.15
CPSF4-201ENST00000292476 FAM46DQ8NEK8 389 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 ZDHHC1Q8WTX9 485 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 NODALQ96S42 347 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 LHPPQ9H008 270 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 TBC1D23Q9NUY8 699 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 CUEDC1Q9NWM3 386 aaPredicted RBP15.97■□□□□ 0.15
CPSF4-201ENST00000292476 ANKMY1Q9P2S6 941 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 NCDNQ9UBB6 729 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 KLF15Q9UIH9 416 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 BAG5Q9UL15 447 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 FRYLO94915 3013 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 LRP4O75096 1905 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 THADAQ6YHU6 1953 aa15.97■□□□□ 0.15
CPSF4-201ENST00000292476 B4GAT1O43505 415 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 JRKO75564 520 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 CLEC3AO75596 197 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 LRATO95237 230 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 TGFB1P01137 390 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 WNT1P04628 370 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 HTR1AP08908 422 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 ANXA4P09525 319 aaPredicted RBP15.96■□□□□ 0.15
CPSF4-201ENST00000292476 PSMB5P28074 263 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 AHRP35869 848 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 STT3AP46977 705 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 ENTPD1P49961 510 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 ARFIP1P53367 373 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 ITGA1P56199 1179 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 NXPH1P58417 271 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 UBE2IP63279 158 aaKnown RBP15.96■□□□□ 0.15
CPSF4-201ENST00000292476 SLC14A1Q13336 389 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 SPIDRQ14159 915 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 ZNF542PQ5EBM4 170 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 FGD3Q5JSP0 725 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 DEPDC1Q5TB30 811 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 LAIR2Q6ISS4 152 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 ANKRD26P1Q6NSI1 321 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms