RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 EFNA1P20827 205 aaPredicted RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 CSRP1P21291 193 aaKnown RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 TIA1P31483 386 aaKnown RBP eCLIP8□□□□□ -1.13
PTPDC1-201ENST00000288976 TAS2R50P59544 299 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 ZFP36L1Q07352 338 aaKnown RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 PRTGQ2VWP7 1150 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 COQ5Q5HYK3 327 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 TLDC1Q6P9B6 456 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 CAMKMTQ7Z624 323 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 ZC3H7AQ8IWR0 971 aaKnown RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 NATD1Q8N6N6 113 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 TTC29Q8NA56 475 aaPredicted RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 ZNF248Q8NDW4 579 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 MS4A6EQ96DS6 147 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 MTERF3Q96E29 417 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 TSSK3Q96PN8 268 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 DDX31Q9H8H2 851 aaKnown RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 GPR45Q9Y5Y3 372 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 IGHV5-10-1A0A0J9YXX1 117 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 SLC9B1P1A6NJY1 282 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 CAPN14A8MX76 684 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 MCIDASD6RGH6 385 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 H3BMH7 237 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 CLDN4O14493 209 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 RGS5O15539 181 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 SNRNP200O75643 2136 aaKnown RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 HOXC12P31275 282 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 GFERP55789 205 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 POLE2P56282 527 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 MEF2AQ02078 507 aaPredicted RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 ACY1Q03154 408 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 CHRNB3Q05901 458 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 NDUFA9Q16795 377 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 DPY19L1Q2PZI1 675 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 OR4C11Q6IEV9 310 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 FAM92BQ6ZTR7 304 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 MED25Q71SY5 747 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 YTHDF3Q7Z739 585 aaKnown RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 OR10Q1Q8NGQ4 319 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 XAGE5Q8WWM1 108 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 CATSPER2Q96P56 530 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 FCRL4Q96PJ5 515 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 SERINC2Q96SA4 455 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 ZNF717Q9BY31 904 aaPredicted RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 WDR55Q9H6Y2 383 aaPredicted RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 RPRD1BQ9NQG5 326 aaKnown RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 A0A0A6YYD5 115 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 BBIP1A8MTZ0 92 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 BSGP35613 385 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 CLK1P49759 484 aaKnown RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 PPP1CAP62136 330 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 RAE1P78406 368 aaKnown RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 STPG1Q5TH74 334 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 RBM44Q6ZP01 1051 aaKnown RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 RIPOR1Q6ZS17 1223 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 TRPM8Q7Z2W7 1104 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 ALYREFQ86V81 257 aaKnown RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 MCATQ8IVS2 390 aaKnown RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 KIF2BQ8N4N8 673 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 METTL27Q8N6F8 245 aaPredicted RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 RNASE11Q8TAA1 199 aaKnown RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 SLC13A3Q8WWT9 602 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 TESCQ96BS2 214 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 MVB12AQ96EY5 273 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 PRR11Q96HE9 360 aaPredicted RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 FAIM2Q9BWQ8 316 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 PTGDR2Q9Y5Y4 395 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 DOCK10Q96BY6 2186 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 NAV3Q8IVL0 2385 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 IGHV5-51A0A0C4DH38 117 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 FCHO1O14526 889 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 ALDOCP09972 364 aaKnown RBP7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 RBMS1P29558 406 aaKnown RBP7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 YBX1P67809 324 aaKnown RBP7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 ARSJQ5FYB0 599 aaPredicted RBP7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 TOR1AIP1Q5JTV8 583 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 MR1Q95460 341 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 CCDC74BQ96LY2 380 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 MTERF1Q99551 399 aaKnown RBP7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 S100A13Q99584 98 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 COPG1Q9Y678 874 aaKnown RBP7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 C4orf47A7E2U8 309 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 H0YGG7 62 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 H3BNH8 94 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 AQP1P29972 269 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 ARF3P61204 181 aaPredicted RBP7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 RPL38P63173 70 aaKnown RBP7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 CYP4F3Q08477 520 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 FAM53BQ14153 422 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 SNCBQ16143 134 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 NOXRED1Q6NXP6 359 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 TRIM40Q6P9F5 258 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 ABHD17CQ6PCB6 329 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 BNC2Q6ZN30 1099 aaPredicted RBP7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 LRRC74BQ6ZQY2 392 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 CSNK1A1LQ8N752 337 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 ZNF740Q8NDX6 193 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 DNAJB8Q8NHS0 232 aa7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 THAP3Q8WTV1 239 aaPredicted RBP7.99□□□□□ -1.13
PTPDC1-201ENST00000288976 LDAHQ9H6V9 325 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms