RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 CPSF4O95639 269 aaKnown RBP9.91□□□□□ -0.82
SKA1-201ENST00000285116 SRCP12931 536 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 HLA-EP13747 358 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 SLC7A9P82251 487 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 DAB2P98082 770 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 RHAGQ02094 409 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 TP53BP2Q13625 1128 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 SLC35F1Q5T1Q4 408 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 GCNT6Q5T4J0 391 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 GALNT10Q86SR1 603 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 YIPF7Q8N8F6 280 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 TP53I13Q8NBR0 393 aaPredicted RBP9.91□□□□□ -0.82
SKA1-201ENST00000285116 AUTS2Q8WXX7 1259 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 REPS1Q96D71 796 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 ASIC4Q96FT7 647 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 PIP5K1AQ99755 562 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 FAM83DQ9H4H8 585 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 TIGARQ9NQ88 270 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 TMEM184CQ9NVA4 438 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 GPATCH2Q9NW75 528 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 HCN4Q9Y3Q4 1203 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 C1QBP02746 253 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 NUDT7P0C024 238 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 RPL17P18621 184 aaKnown RBP9.91□□□□□ -0.82
SKA1-201ENST00000285116 CPN2P22792 545 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 ITPKAP23677 461 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 RPS19P39019 145 aaKnown RBP9.91□□□□□ -0.82
SKA1-201ENST00000285116 SNRPGP62308 76 aaKnown RBP9.91□□□□□ -0.82
SKA1-201ENST00000285116 HSPA14Q0VDF9 509 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 RAB33AQ14088 237 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 QPRTQ15274 297 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 XKR6Q5GH73 641 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 MEDAGQ5VYS4 303 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 FAAH2Q6GMR7 532 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 UNC5DQ6UXZ4 953 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 LAX1Q8IWV1 398 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 TCEAL8Q8IYN2 117 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 LGI4Q8N135 537 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 NAGSQ8N159 534 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 OR5M11Q96RB7 305 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 CNPPD1Q9BV87 410 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 BARHL1Q9BZE3 327 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 C11orf54Q9H0W9 315 aaPredicted RBP9.91□□□□□ -0.82
SKA1-201ENST00000285116 REEP4Q9H6H4 257 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 ZNF556Q9HAH1 456 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 IL21Q9HBE4 155 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 WBP1LQ9NX94 342 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 LSM7Q9UK45 103 aaKnown RBP9.91□□□□□ -0.82
SKA1-201ENST00000285116 EXO1Q9UQ84 846 aaKnown RBP9.91□□□□□ -0.82
SKA1-201ENST00000285116 CMAHPQ9Y471 501 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 CFAP20Q9Y6A4 193 aaKnown RBP9.91□□□□□ -0.82
SKA1-201ENST00000285116 NUP210Q8TEM1 1887 aaPredicted RBP9.91□□□□□ -0.82
SKA1-201ENST00000285116 IQCMA0A1B0GVH7 501 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 TSPAN11A1L157 253 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 PDE9AO76083 593 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 POP4O95707 220 aaKnown RBP9.9□□□□□ -0.82
SKA1-201ENST00000285116 ANXA4P09525 319 aaPredicted RBP9.9□□□□□ -0.82
SKA1-201ENST00000285116 CCNYL3P0C7X3 344 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 HOXD10P28358 340 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 CDC42P60953 191 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 SSX1Q16384 188 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 C22orf39Q6P5X5 142 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.9□□□□□ -0.82
SKA1-201ENST00000285116 DNAJB7Q7Z6W7 309 aaPredicted RBP9.9□□□□□ -0.82
SKA1-201ENST00000285116 SLC44A2Q8IWA5 706 aaPredicted RBP9.9□□□□□ -0.82
SKA1-201ENST00000285116 B3GNT7Q8NFL0 401 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 SLC25A19Q9HC21 320 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 MYNNQ9NPC7 610 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 C1GALT1Q9NS00 363 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 ACER3Q9NUN7 267 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 IMPAD1Q9NX62 359 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 MS4A12Q9NXJ0 267 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 B3GNT2Q9NY97 397 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 STOX2Q9P2F5 926 aaPredicted RBP9.9□□□□□ -0.82
SKA1-201ENST00000285116 TEKT2Q9UIF3 430 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 NUP50Q9UKX7 468 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 A0A0B4J293 547 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 ARHGEF33A8MVX0 844 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 E7EQ34 232 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 PCDH7O60245 1069 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 ARAFP10398 606 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 DDX5P17844 614 aaKnown RBP9.9□□□□□ -0.82
SKA1-201ENST00000285116 RHCEP18577 417 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 GKP32189 559 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 ZXDBP98169 803 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 DMC1Q14565 340 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 EXOC3L2Q2M3D2 409 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 FAM214AQ32MH5 1076 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 GLYR1Q49A26 553 aaPredicted RBP9.9□□□□□ -0.82
SKA1-201ENST00000285116 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.9□□□□□ -0.82
SKA1-201ENST00000285116 PLAG1Q6DJT9 500 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 ZNF770Q6IQ21 691 aaPredicted RBP9.9□□□□□ -0.82
SKA1-201ENST00000285116 FAM131AQ6UXB0 335 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 CCDC149Q6ZUS6 474 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 TRIM48Q8IWZ4 208 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 LAS2Q8IYD9 372 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 GDPD1Q8N9F7 314 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 OR4A15Q8NGL6 344 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 RNF31Q96EP0 1072 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 IGSF21Q96ID5 467 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms