RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 PRICKLE3O43900 615 aaPredicted RBP6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 PDE9AO76083 593 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 MFN2O95140 757 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 FADS2O95864 444 aaKnown RBP6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 IFNW1P05000 195 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 IMPDH2P12268 514 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 DRD2P14416 443 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 ZNF12P17014 697 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 MANFP55145 182 aaKnown RBP6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 C21orf59P57076 290 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 RPS21P63220 83 aaKnown RBP6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 CYP4F2P78329 520 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 PUM1Q14671 1186 aaKnown RBP eCLIP6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 ZIC1Q15915 447 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 ADPRMQ3LIE5 342 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 OR4C11Q6IEV9 310 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 DUS1LQ6P1R4 473 aaKnown RBP6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 CCDC103Q8IW40 242 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 ELSPBP1Q96BH3 223 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 SCARF2Q96GP6 870 aaPredicted RBP6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 C12orf66Q96MD2 445 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 CAMK1GQ96NX5 476 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 AICDAQ9GZX7 198 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 BTBD1Q9H0C5 482 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 TEX10Q9NXF1 929 aaPredicted RBP6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 GALNT8Q9NY28 637 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 ZNF226Q9NYT6 803 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 RAB23Q9ULC3 237 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 LRIT2A6NDA9 550 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 CLCA1A8K7I4 914 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 J3KTA2 159 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 HMGN4O00479 90 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 FFAR1O14842 300 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 PLRG1O43660 514 aaKnown RBP6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 OR1F1O43749 312 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 LCMT2O60294 686 aaKnown RBP6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 CCNB2O95067 398 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 GADD45GO95257 159 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 CEACAM5P06731 702 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 ACP5P13686 325 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 GRK3P35626 688 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 TNFRSF4P43489 277 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 KIR2DL1P43626 348 aaPredicted RBP6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 ABATP80404 500 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 DUSP7Q16829 419 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 ANKDD1AQ495B1 522 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 ZNF776Q68DI1 518 aaPredicted RBP6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 Q6ZPB1 254 aaPredicted RBP6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 AHSA2Q719I0 299 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 C6orf120Q7Z4R8 191 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 P3H2Q8IVL5 708 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 YAF2Q8IY57 180 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 SLC15A4Q8N697 577 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 SMYD1Q8NB12 490 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 ST13P5Q8NFI4 369 aaPredicted RBP6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 GPR32P1Q8NGA4 272 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 RASSF5Q8WWW0 418 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 MYDGFQ969H8 173 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 TMEM19Q96HH6 336 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 TEFMQ96QE5 360 aaKnown RBP6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 FERD3LQ96RJ6 166 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 MAPKAP1Q9BPZ7 522 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 COPS4Q9BT78 406 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 RSPO3Q9BXY4 272 aaPredicted RBP6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 ZNF556Q9HAH1 456 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 FTSJ1Q9UET6 329 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 ACAD8Q9UKU7 415 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 SH3GLB1Q9Y371 365 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 FAM32AQ9Y421 112 aaKnown RBP6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 SNX8Q9Y5X2 465 aa6.88□□□□□ -1.31
SPARCL1-201ENST00000282470 A0A1W2PP55 124 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 ZAR1LA6NP61 321 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 PCDH17O14917 1159 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 VIPP01282 170 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 BCHEP06276 602 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 CDK1P06493 297 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 EN2P19622 333 aaPredicted RBP6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 LIM2P55344 173 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 TBC1D25Q3MII6 688 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 ITPRIPL2Q3MIP1 535 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 COLEC12Q5KU26 742 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 C1QTNF12Q5T7M4 302 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 FAM92BQ6ZTR7 304 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 RBM12BQ8IXT5 1001 aaKnown RBP6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 OR9Q2Q8NGE9 314 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 OR52J3Q8NH60 311 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 DYNC2LI1Q8TCX1 351 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 PHF10Q8WUB8 498 aaKnown RBP6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 ITPAQ9BY32 194 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 SERHL2Q9H4I8 314 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 MVB12BQ9H7P6 319 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 AKIP1Q9NQ31 210 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 FBXO8Q9NRD0 319 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 FAIMQ9NVQ4 179 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 NDOR1Q9UHB4 597 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 YBX2Q9Y2T7 364 aaKnown RBP6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 DGKBQ9Y6T7 804 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 DOCK9Q9BZ29 2069 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 SH3D21A4FU49 640 aa6.87□□□□□ -1.31
SPARCL1-201ENST00000282470 C5orf58C9J3I9 102 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms