RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 CLCA3PQ9Y6N3 262 aa6.13□□□□□ -1.43
CD44-204ENST00000279452 URB1O60287 2271 aaKnown RBP6.13□□□□□ -1.43
CD44-204ENST00000279452 LOC102723996A0A087X1L8 192 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 UQCRHLA0A096LP55 91 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 TRBV11-1A0A0K0K1C0 115 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 A0A1W2PR48 441 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 TCRBV16S1A1N1A0A5B0 115 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 DYTNA2CJ06 578 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 BLACEA4D250 179 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 SAGE2PA6NJ88 616 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 C17orf105B2RV13 164 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 SLC28A1O00337 649 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 CYR61O00622 381 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 RGS14O43566 566 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 SLC28A2O43868 658 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 FGF17O60258 216 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 CTNSO60931 367 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 SEC22BO75396 215 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 LYPLA1O75608 230 aaPredicted RBP6.12□□□□□ -1.43
CD44-204ENST00000279452 ERAL1O75616 437 aaKnown RBP6.12□□□□□ -1.43
CD44-204ENST00000279452 SERPINE1P05121 402 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 ANXA4P09525 319 aaPredicted RBP6.12□□□□□ -1.43
CD44-204ENST00000279452 LINC00032P0C843 101 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 PIK3R1P27986 724 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 TPP2P29144 1249 aaPredicted RBP6.12□□□□□ -1.43
CD44-204ENST00000279452 ARFIP1P53367 373 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 SLC26A5P58743 744 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 RPL38P63173 70 aaKnown RBP6.12□□□□□ -1.43
CD44-204ENST00000279452 ARG2P78540 354 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 PLIN5Q00G26 463 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 OC90Q02509 493 aaPredicted RBP6.12□□□□□ -1.43
CD44-204ENST00000279452 C19orf57Q0VDD7 668 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 GALNT1Q10472 559 aaPredicted RBP6.12□□□□□ -1.43
CD44-204ENST00000279452 KLRB1Q12918 225 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 SERTAD2Q14140 314 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 PDCD2Q16342 344 aaPredicted RBP6.12□□□□□ -1.43
CD44-204ENST00000279452 GALNTL6Q49A17 601 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 CRB2Q5IJ48 1285 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 NDUFAF5Q5TEU4 345 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 KANK2Q63ZY3 851 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 B3GNTL1Q67FW5 361 aaPredicted RBP6.12□□□□□ -1.43
CD44-204ENST00000279452 FCRLBQ6BAA4 426 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 PLAG1Q6DJT9 500 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 OR52E8Q6IFG1 317 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 ISLR2Q6UXK2 745 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 RIPOR1Q6ZS17 1223 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 SCUBE1Q8IWY4 988 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 WDFY3Q8IZQ1 3526 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 KIF2BQ8N4N8 673 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 ZADH2Q8N4Q0 377 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 SLC5A8Q8N695 610 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 AMER2Q8N7J2 671 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 DOK4Q8TEW6 326 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 THAP3Q8WTV1 239 aaPredicted RBP6.12□□□□□ -1.43
CD44-204ENST00000279452 TWIST2Q8WVJ9 160 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 DYDC1Q8WWB3 177 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 TANKQ92844 425 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 NCLNQ969V3 563 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 PPWD1Q96BP3 646 aaKnown RBP6.12□□□□□ -1.43
CD44-204ENST00000279452 KLHL29Q96CT2 875 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 APIPQ96GX9 242 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 PPP1R36Q96LQ0 422 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 CNPPD1Q9BV87 410 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 ZNF717Q9BY31 904 aaPredicted RBP6.12□□□□□ -1.43
CD44-204ENST00000279452 DEFB126Q9BYW3 111 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 OR8D2Q9GZM6 311 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.12□□□□□ -1.43
CD44-204ENST00000279452 ZNF552Q9H707 407 aaPredicted RBP6.12□□□□□ -1.43
CD44-204ENST00000279452 DDX31Q9H8H2 851 aaKnown RBP6.12□□□□□ -1.43
CD44-204ENST00000279452 TNFRSF12AQ9NP84 129 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 ADAP2Q9NPF8 381 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 SLAMF7Q9NQ25 335 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 MIEF1Q9NQG6 463 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 PLSCR2Q9NRY7 297 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 PSD3Q9NYI0 1048 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 KCMF1Q9P0J7 381 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 COPS7AQ9UBW8 275 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 ADAM29Q9UKF5 820 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 PPT2Q9UMR5 302 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 POLR3HQ9Y535 204 aaPredicted RBP6.12□□□□□ -1.43
CD44-204ENST00000279452 FREM2Q5SZK8 3169 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 USP24Q9UPU5 2620 aa6.12□□□□□ -1.43
CD44-204ENST00000279452 KNTC1P50748 2209 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 PCSK5Q92824 1860 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 IGKV3D-11A0A0A0MRZ8 115 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 C1orf226A1L170 272 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 SYNDIG1LA6NDD5 238 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 TTLL8A6PVC2 850 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 WASHC1A8K0Z3 465 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 TMEM114B3SHH9 223 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 TGFBR3LH3BV60 316 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 PIP5K1BO14986 540 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 BIRC5O15392 142 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 PROM1O43490 865 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 CEACAM4O75871 244 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 RSL1D1O76021 490 aaKnown RBP6.11□□□□□ -1.43
CD44-204ENST00000279452 IL3P08700 152 aa6.11□□□□□ -1.43
CD44-204ENST00000279452 ALOX15P16050 662 aaPredicted RBP6.11□□□□□ -1.43
CD44-204ENST00000279452 H2AFXP16104 143 aaPredicted RBP6.11□□□□□ -1.43
CD44-204ENST00000279452 NT5EP21589 574 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms