RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 PDP1Q9P0J1 537 aaPredicted RBP4.32□□□□□ -1.72
CD44-202ENST00000278385 MBD2Q9UBB5 411 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 ATPIF1Q9UII2 106 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 ATAD5Q96QE3 1844 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 CDK5RAP2Q96SN8 1893 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 ILVBLA1L0T0 632 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 TMEM221A6NGB7 291 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 ANKRD30BLA7E2S9 258 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 C12orf71A8MTZ7 269 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 WASH3PC4AMC7 463 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 GOLGA8TH3BQL2 631 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 ZNF197O14709 1029 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 ZBTB5O15062 677 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 LSM1O15116 133 aaKnown RBP4.31□□□□□ -1.72
CD44-202ENST00000278385 MPPED1O15442 326 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 FLRT2O43155 660 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 AP5Z1O43299 807 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 DFFBO76075 338 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 OR4F21O95013 312 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 STBD1O95210 358 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 CBX6O95503 412 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 TIMP1P01033 207 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 RAB40ALP0C0E4 278 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 MATN1P21941 496 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 BMP5P22003 454 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 FBLP22087 321 aaKnown RBP4.31□□□□□ -1.72
CD44-202ENST00000278385 ELAVL4P26378 380 aaKnown RBP4.31□□□□□ -1.72
CD44-202ENST00000278385 YWHAQP27348 245 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 TYK2P29597 1187 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 NMT1P30419 496 aaKnown RBP4.31□□□□□ -1.72
CD44-202ENST00000278385 GPR4P46093 362 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 FMO5P49326 533 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 SSTP61278 116 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 DR1Q01658 176 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 GHRHRQ02643 423 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 SPOCK1Q08629 439 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 FUT7Q11130 342 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 TROAPQ12815 778 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 GRIK3Q13003 919 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 SLAQ13239 276 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 RFTN1Q14699 578 aaPredicted RBP4.31□□□□□ -1.72
CD44-202ENST00000278385 HERC3Q15034 1050 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 STK38Q15208 465 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 BCL2A1Q16548 175 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 EXOC3L2Q2M3D2 409 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 PARP6Q2NL67 630 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 QRICH1Q2TAL8 776 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 EFHC1Q5JVL4 640 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 ZNF618Q5T7W0 954 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 PTRHD1Q6GMV3 140 aaKnown RBP4.31□□□□□ -1.72
CD44-202ENST00000278385 FAM109BQ6ICB4 259 aaPredicted RBP4.31□□□□□ -1.72
CD44-202ENST00000278385 PRSS55Q6UWB4 352 aaPredicted RBP4.31□□□□□ -1.72
CD44-202ENST00000278385 QSOX2Q6ZRP7 698 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 TRMT10CQ7L0Y3 403 aaKnown RBP4.31□□□□□ -1.72
CD44-202ENST00000278385 CYB5R4Q7L1T6 521 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 TRPM8Q7Z2W7 1104 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 ERASQ7Z444 233 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 IGFN1Q86VF2 1251 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 FJX1Q86VR8 437 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 PAQR7Q86WK9 346 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 LAX1Q8IWV1 398 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 FBXO16Q8IX29 292 aaPredicted RBP4.31□□□□□ -1.72
CD44-202ENST00000278385 C1orf87Q8N0U7 546 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 GCNT2Q8N0V5 402 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 FAM47BQ8NA70 645 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 TRPV3Q8NET8 790 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 RDM1Q8NG50 284 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 ANGPTL6Q8NI99 470 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 GLYATL2Q8WU03 294 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 TMEM170AQ8WVE7 144 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 LINC00476Q8WZB0 136 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 OSTF1Q92882 214 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 BADQ92934 168 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 EMG1Q92979 244 aaKnown RBP4.31□□□□□ -1.72
CD44-202ENST00000278385 IGSF8Q969P0 613 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 FAM136AQ96C01 138 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 SLC47A1Q96FL8 570 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 WDYHV1Q96HA8 205 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 EGLN2Q96KS0 407 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 LRR1Q96L50 414 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 PANX1Q96RD7 426 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 TMEM43Q9BTV4 400 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 ALG8Q9BVK2 526 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 DPCDQ9BVM2 203 aaPredicted RBP4.31□□□□□ -1.72
CD44-202ENST00000278385 ADNPQ9H2P0 1102 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 TMEM185BQ9H7F4 350 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 MEAF6Q9HAF1 191 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 CHMP1AQ9HD42 196 aaPredicted RBP4.31□□□□□ -1.72
CD44-202ENST00000278385 PDGFCQ9NRA1 345 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 CHRAC1Q9NRG0 131 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 RDH8Q9NYR8 311 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 CTTNBP2NLQ9P2B4 639 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 ERVK-18Q9QC07 812 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 RHCGQ9UBD6 479 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 CTSFQ9UBX1 484 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 DHDHQ9UQ10 334 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 ZNF510Q9Y2H8 683 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 LSM4Q9Y4Z0 139 aaKnown RBP4.31□□□□□ -1.72
CD44-202ENST00000278385 BZW2Q9Y6E2 419 aaKnown RBP4.31□□□□□ -1.72
CD44-202ENST00000278385 CEPT1Q9Y6K0 416 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms