RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ARHGAP11AQ6P4F7 1023 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 SEM1Q6ZVN7 128 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 CREG2Q8IUH2 290 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 C9orf40Q8IXQ3 194 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 ZNF595Q8IYB9 648 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 NKAPQ8N5F7 415 aaKnown RBP8.28□□□□□ -1.08
TPM3-201ENST00000271850 FBXO36Q8NEA4 188 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 OR2L5Q8NG80 312 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 OR5M9Q8NGP3 310 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 DOK4Q8TEW6 326 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 ZNF721Q8TF20 911 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 CHTF18Q8WVB6 975 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 VPS39Q96JC1 886 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 F2RL3Q96RI0 385 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 NAP1L3Q99457 506 aaPredicted RBP8.28□□□□□ -1.08
TPM3-201ENST00000271850 EGFL8Q99944 293 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 MAPKAP1Q9BPZ7 522 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 CNPPD1Q9BV87 410 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 SORBS1Q9BX66 1292 aaKnown RBP8.28□□□□□ -1.08
TPM3-201ENST00000271850 TRIM54Q9BYV2 358 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 REXO4Q9GZR2 422 aaKnown RBP8.28□□□□□ -1.08
TPM3-201ENST00000271850 TP63Q9H3D4 680 aaPredicted RBP8.28□□□□□ -1.08
TPM3-201ENST00000271850 LIME1Q9H400 295 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 NT5DC2Q9H857 520 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 SPRR3Q9UBC9 169 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 VTI1BQ9UEU0 232 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 YARS2Q9Y2Z4 477 aaKnown RBP8.28□□□□□ -1.08
TPM3-201ENST00000271850 KIAA1549Q9HCM3 1950 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 NAV3Q8IVL0 2385 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 A0A0G2JNJ9 132 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 LRRC3CA6NJW4 275 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 WASHC1A8K0Z3 465 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 A8MVJ9 347 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 PHGDHO43175 533 aaKnown RBP8.27□□□□□ -1.09
TPM3-201ENST00000271850 B3GALT2O43825 422 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 FGF17O60258 216 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 KLK8O60259 260 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 CTNSO60931 367 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 SH3BGRLO75368 114 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 PRKRAO75569 313 aaKnown RBP8.27□□□□□ -1.09
TPM3-201ENST00000271850 ZFAND5O76080 213 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 SCELO95171 688 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 CLPSP04118 112 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 IGKV3-11P04433 115 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 HOXD4P09016 255 aaPredicted RBP8.27□□□□□ -1.09
TPM3-201ENST00000271850 RFPL3SP0C7P2 107 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 GLI4P10075 376 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 RPL21P46778 160 aaKnown RBP8.27□□□□□ -1.09
TPM3-201ENST00000271850 HNMTP50135 292 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 STXBP1P61764 594 aaKnown RBP8.27□□□□□ -1.09
TPM3-201ENST00000271850 RNF4P78317 190 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 IGLV3-21P80748 117 aaPredicted RBP8.27□□□□□ -1.09
TPM3-201ENST00000271850 SLC13A2Q13183 592 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 ZKSCAN8Q15776 578 aaPredicted RBP8.27□□□□□ -1.09
TPM3-201ENST00000271850 HYAL4Q2M3T9 481 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 TRILQ7L0X0 811 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 ADAMTSL2Q86TH1 951 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 KLHL7Q8IXQ5 586 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 PDIK1LQ8N165 341 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 Q8N3U1 123 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 TBC1D19Q8N5T2 526 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 PDPRQ8NCN5 879 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 SLC2A12Q8TD20 617 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 ZNF473Q8WTR7 871 aaKnown RBP8.27□□□□□ -1.09
TPM3-201ENST00000271850 ASB15Q8WXK1 588 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 CCT6BQ92526 530 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 RND1Q92730 232 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 UCN3Q969E3 161 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 LRRC39Q96DD0 335 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 SERINC2Q96SA4 455 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 TTYH2Q9BSA4 534 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 MS4A8Q9BY19 250 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 ZNF717Q9BY31 904 aaPredicted RBP8.27□□□□□ -1.09
TPM3-201ENST00000271850 ALOXE3Q9BYJ1 711 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 DERL2Q9GZP9 239 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 RHOJQ9H4E5 214 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 EHD1Q9H4M9 534 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 TIMMDC1Q9NPL8 285 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 HPF1Q9NWY4 346 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 TUBA8Q9NY65 449 aaPredicted RBP8.27□□□□□ -1.09
TPM3-201ENST00000271850 GPRC5BQ9NZH0 403 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 COQ3Q9NZJ6 369 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 CTNNAL1Q9UBT7 734 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 Q9UFV3 132 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 PTBP2Q9UKA9 531 aaKnown RBP8.27□□□□□ -1.09
TPM3-201ENST00000271850 L3MBTL1Q9Y468 752 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 ATG4BQ9Y4P1 393 aa8.27□□□□□ -1.09
TPM3-201ENST00000271850 NIPBLQ6KC79 2804 aaeCLIP8.26□□□□□ -1.096e-7■■■□□ 15
TPM3-201ENST00000271850 GOLGA6L10A0A0M3HER8 536 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 A0A1W2PS29 197 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 C17orf105B2RV13 164 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 CNR1P21554 472 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 ATP5A1P25705 553 aaKnown RBP8.26□□□□□ -1.09
TPM3-201ENST00000271850 SSTR1P30872 391 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 DNAJA1P31689 397 aaKnown RBP8.26□□□□□ -1.09
TPM3-201ENST00000271850 PIGAP37287 484 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 MTTPP55157 894 aa8.26□□□□□ -1.09
TPM3-201ENST00000271850 PDIA2Q13087 525 aaKnown RBP8.26□□□□□ -1.09
TPM3-201ENST00000271850 ZNF791Q3KP31 576 aaPredicted RBP8.26□□□□□ -1.09
TPM3-201ENST00000271850 FAM219BQ5XKK7 198 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms