RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 TARDBPQ13148 414 aaKnown RBP eCLIP9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 STX5Q13190 355 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 CAPRIN1Q14444 709 aaKnown RBP9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 HEPACAMQ14CZ8 416 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 MAPRE2Q15555 327 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 LACTB2Q53H82 288 aaPredicted RBP9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 LCN10Q6JVE6 187 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 DNAJC14Q6Y2X3 702 aaPredicted RBP9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 IKBIPQ70UQ0 350 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 RAB11FIP2Q7L804 512 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 FAM9CQ8IZT9 166 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 DSELQ8IZU8 1212 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 KIF2BQ8N4N8 673 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 RBM15BQ8NDT2 890 aaKnown RBP9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 OR51Q1Q8NH59 317 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 DOK4Q8TEW6 326 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 COL26A1Q96A83 441 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 COQ8BQ96D53 544 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 DEPDC7Q96QD5 511 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 CMKLR1Q99788 373 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 SLC39A3Q9BRY0 314 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 RTKNQ9BST9 563 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 STRADBQ9C0K7 418 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 LYRM4Q9HD34 91 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 SLAMF7Q9NQ25 335 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 SERHLQ9NQF3 203 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 ENAMQ9NRM1 1142 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 SLC22A11Q9NSA0 550 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 TXLNGQ9NUQ3 528 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 TAS2R1Q9NYW7 299 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 B3GALT1Q9Y5Z6 326 aa9.18□□□□□ -0.94
SNRNP40-201ENST00000263694 SPTBN2O15020 2390 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 A0A1B0GX78 115 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 C1orf226A1L170 272 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 DCDC2BA2VCK2 349 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 SLC30A4O14863 429 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 CFLARO15519 480 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 GUCY1B2O75343 617 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 C6orf47O95873 294 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 ABCB1P08183 1280 aaPredicted RBP9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 CEACAM1P13688 526 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 DRD2P14416 443 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 CPOXP36551 454 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 FEN1P39748 380 aaKnown RBP9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 XCR1P46094 333 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 ARSFP54793 590 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 RAB38P57729 211 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 ACTN3Q08043 901 aaPredicted RBP9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 IL11RAQ14626 422 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 MAPKAPK3Q16644 382 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 RSPO4Q2I0M5 234 aaPredicted RBP9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 GTDC1Q4AE62 458 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 VWA2Q5GFL6 755 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 C3orf38Q5JPI3 329 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 C6orf10Q5SRN2 563 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 RHBDD2Q6NTF9 364 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 SLC48A1Q6P1K1 146 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 FAM199XQ6PEV8 388 aaPredicted RBP9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 SHISA6Q6ZSJ9 500 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 COX15Q7KZN9 410 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 ZNF551Q7Z340 670 aaPredicted RBP9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 R3HCC1LQ7Z5L2 792 aaKnown RBP9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 PRSS58Q8IYP2 241 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 CLEC4FQ8N1N0 589 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 OR8J2Q8NGG1 315 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 DNAJB14Q8TBM8 379 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 GTF2H4Q92759 462 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 KLHL29Q96CT2 875 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 PRPF18Q99633 342 aaKnown RBP9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 FAIM2Q9BWQ8 316 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 NPLQ9BXD5 320 aaPredicted RBP9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 RPF2Q9H7B2 306 aaKnown RBP9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 EFCAB1Q9HAE3 211 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 ZNF304Q9HCX3 659 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 FBXO8Q9NRD0 319 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 MRGBPQ9NV56 204 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 TRPC4Q9UBN4 977 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 PHF11Q9UIL8 331 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 LEF1Q9UJU2 399 aaPredicted RBP9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 UTS2RQ9UKP6 389 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 PACSIN3Q9UKS6 424 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 SATB2Q9UPW6 733 aa9.17□□□□□ -0.94
SNRNP40-201ENST00000263694 B4E171 279 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 H0YIG0 161 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 TGFBR3LH3BV60 316 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 PLD2O14939 933 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 FGF17O60258 216 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 KCNK5O95279 499 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 RNH1P13489 461 aaKnown RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 FBLP22087 321 aaKnown RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 BUD31P41223 144 aaPredicted RBP9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 TSPAN7P41732 249 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 EFNA3P52797 238 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 ART3Q13508 389 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 NFYCQ13952 458 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 ARHGAP40Q5TG30 622 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 DLEU7Q6UYE1 221 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 CAMKMTQ7Z624 323 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 CCDC116Q8IYX3 515 aa9.16□□□□□ -0.94
SNRNP40-201ENST00000263694 TSPEARQ8WU66 669 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms