RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 GPRIN1Q7Z2K8 1008 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 ZSCAN1Q8NBB4 408 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 ABHD11Q8NFV4 315 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 LMO3Q8TAP4 145 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 TFGQ92734 400 aaPredicted RBP11.59□□□□□ -0.55
SMG6-201ENST00000263073 SCAMP4Q969E2 229 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 ORAI3Q9BRQ5 295 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 SPATA9Q9BWV2 254 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 TYRP1P17643 537 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 SH3BP2P78314 561 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 SGCBQ16585 318 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 ZNF791Q3KP31 576 aaPredicted RBP11.59□□□□□ -0.55
SMG6-201ENST00000263073 PSAPL1Q6NUJ1 521 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 TMEM107Q6UX40 140 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 RBM12BQ8IXT5 1001 aaKnown RBP11.59□□□□□ -0.55
SMG6-201ENST00000263073 HMGB4Q8WW32 186 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 OSTF1Q92882 214 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 TUBA1CQ9BQE3 449 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 INPP5KQ9BT40 448 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 DOHHQ9BU89 302 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 RGCCQ9H4X1 137 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 FAIMQ9NVQ4 179 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 CDH10Q9Y6N8 788 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 NME4O00746 187 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 TLX3O43711 291 aaPredicted RBP11.59□□□□□ -0.55
SMG6-201ENST00000263073 SPDEFO95238 335 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 PTPN2P17706 415 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 MLLT3P42568 568 aaPredicted RBP11.59□□□□□ -0.55
SMG6-201ENST00000263073 RAB11FIP2Q7L804 512 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 TAS1R3Q7RTX0 852 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 GPAT4Q86UL3 456 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 KREMEN2Q8NCW0 462 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 DENND1AQ8TEH3 1009 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 ZFP90Q8TF47 636 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 CREB3L1Q96BA8 519 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 PIP5K1AQ99755 562 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 RANBP3Q9H6Z4 567 aaPredicted RBP11.59□□□□□ -0.55
SMG6-201ENST00000263073 SRA1Q9HD15 236 aaKnown RBP11.59□□□□□ -0.55
SMG6-201ENST00000263073 ERVK-19Q9WJR5 959 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 ACTL7AQ9Y615 435 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 WNT6Q9Y6F9 365 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 BCKDHAP12694 445 aa11.58□□□□□ -0.55
SMG6-201ENST00000263073 PYCR1P32322 319 aa11.58□□□□□ -0.55
SMG6-201ENST00000263073 ZNF565Q8N9K5 539 aa11.58□□□□□ -0.55
SMG6-201ENST00000263073 NLGN2Q8NFZ4 835 aa11.58□□□□□ -0.55
SMG6-201ENST00000263073 CD99L2Q8TCZ2 262 aa11.58□□□□□ -0.55
SMG6-201ENST00000263073 IL17FQ96PD4 163 aa11.58□□□□□ -0.55
SMG6-201ENST00000263073 CRTAC1Q9NQ79 661 aa11.58□□□□□ -0.55
SMG6-201ENST00000263073 WDR45Q9Y484 360 aa11.58□□□□□ -0.55
SMG6-201ENST00000263073 ANKRD26Q9UPS8 1709 aa11.58□□□□□ -0.55
SMG6-201ENST00000263073 RTCAO00442 366 aaKnown RBP11.58□□□□□ -0.56
SMG6-201ENST00000263073 SOX1O00570 391 aaPredicted RBP11.58□□□□□ -0.56
SMG6-201ENST00000263073 S100A12P80511 92 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 ZNF763Q0D2J5 394 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 SPHARQ15513 63 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 CGB2Q6NT52 195 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 OR2AP1Q8NGE2 309 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 OR9Q2Q8NGE9 314 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 OR13J1Q8NGT2 312 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 PCNPQ8WW12 178 aaKnown RBP11.58□□□□□ -0.56
SMG6-201ENST00000263073 PRICKLE1Q96MT3 831 aaPredicted RBP11.58□□□□□ -0.56
SMG6-201ENST00000263073 REEP4Q9H6H4 257 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 BCL9LQ86UU0 1499 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 PMM2O15305 246 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 ETFAP13804 333 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 HTR1EP28566 365 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 ATP4BP51164 291 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 LRIT3Q3SXY7 679 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 KCTD13Q8WZ19 329 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 FEVQ99581 238 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 KCNH6Q9H252 994 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 PHLPP1O60346 1717 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 PRICKLE3O43900 615 aaPredicted RBP11.58□□□□□ -0.56
SMG6-201ENST00000263073 RAD1O60671 282 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 EEDO75530 441 aaKnown RBP11.58□□□□□ -0.56
SMG6-201ENST00000263073 PENKP01210 267 aaPredicted RBP11.58□□□□□ -0.56
SMG6-201ENST00000263073 ETV3P41162 512 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 ETV4P43268 484 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 HCAR3P49019 387 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 SIX1Q15475 284 aaPredicted RBP11.58□□□□□ -0.56
SMG6-201ENST00000263073 RGMBQ6NW40 437 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 FTMTQ8N4E7 242 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 FAM46AQ96IP4 442 aaKnown RBP11.58□□□□□ -0.56
SMG6-201ENST00000263073 NLGN3Q9NZ94 848 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 KLRF1Q9NZS2 232 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 STUB1Q9UNE7 303 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 MYH6P13533 1939 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 A0A1W2PQL4 384 aaPredicted RBP11.58□□□□□ -0.56
SMG6-201ENST00000263073 MEIS3P1A6NDR6 274 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 HMX3A6NHT5 357 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 TMEM150CB9EJG8 249 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 BHMG1C9JSJ3 638 aaPredicted RBP11.58□□□□□ -0.56
SMG6-201ENST00000263073 KDELR3O43731 214 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 ZNF821O75541 412 aaPredicted RBP11.58□□□□□ -0.56
SMG6-201ENST00000263073 MYF6P23409 242 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 MLLT6P55198 1093 aaPredicted RBP11.58□□□□□ -0.56
SMG6-201ENST00000263073 ZNF616Q08AN1 781 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 IRF5Q13568 498 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 C10orf62Q5T681 223 aaPredicted RBP11.58□□□□□ -0.56
SMG6-201ENST00000263073 HES5Q5TA89 166 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms