RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 PROKR1Q8TCW9 393 aa25.99■■□□□ 1.75
SMARCD3-201ENST00000262188 TM4SF18Q96CE8 201 aa25.99■■□□□ 1.75
SMARCD3-201ENST00000262188 MMABQ96EY8 250 aaPredicted RBP25.99■■□□□ 1.75
SMARCD3-201ENST00000262188 NDC1Q9BTX1 674 aa25.99■■□□□ 1.75
SMARCD3-201ENST00000262188 CCDC106Q9BWC9 280 aa25.99■■□□□ 1.75
SMARCD3-201ENST00000262188 SLC39A1Q9NY26 324 aa25.99■■□□□ 1.75
SMARCD3-201ENST00000262188 ATG4BQ9Y4P1 393 aa25.99■■□□□ 1.75
SMARCD3-201ENST00000262188 FAM58BPP0C7Q3 252 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 MAPK1P28482 360 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 KLF10Q13118 480 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 SQLEQ14534 574 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 SLC9A5Q14940 896 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 C3orf38Q5JPI3 329 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 FAM180BQ6P0A1 224 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 GK5Q6ZS86 529 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 MIER2Q8N344 545 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 METTL2AQ96IZ6 378 aaKnown RBP25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 RBCK1Q9BYM8 510 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 C5AR2Q9P296 337 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 ASB4Q9Y574 426 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 hCG_2014768A0A024R1R8 64 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 GLOD5A6NK44 160 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 PRPS2P11908 318 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 STX1BP61266 288 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 NDUFA9Q16795 377 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 AGKQ53H12 422 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 C18orf63Q68DL7 685 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 NANOGNBQ7Z5D8 188 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 FUNDC1Q8IVP5 155 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 CPSF7Q8N684 471 aaKnown RBP25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 EFCAB3Q8N7B9 438 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 CSF3RQ99062 836 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 BTBD10Q9BSF8 475 aa25.98■■□□□ 1.75
SMARCD3-201ENST00000262188 FER1L5A0AVI2 2057 aa25.97■■□□□ 1.75
SMARCD3-201ENST00000262188 PDE5AO76074 875 aa25.97■■□□□ 1.75
SMARCD3-201ENST00000262188 ITGAXP20702 1163 aa25.97■■□□□ 1.75
SMARCD3-201ENST00000262188 MRM1Q6IN84 353 aaKnown RBP25.97■■□□□ 1.75
SMARCD3-201ENST00000262188 POU5F2Q8N7G0 328 aa25.97■■□□□ 1.75
SMARCD3-201ENST00000262188 PUM2Q8TB72 1066 aaKnown RBP eCLIP25.97■■□□□ 1.75
SMARCD3-201ENST00000262188 LIN37Q96GY3 246 aaPredicted RBP25.97■■□□□ 1.75
SMARCD3-201ENST00000262188 SERINC2Q96SA4 455 aa25.97■■□□□ 1.75
SMARCD3-201ENST00000262188 SLC7A5P2Q9GIP4 190 aa25.97■■□□□ 1.75
SMARCD3-201ENST00000262188 ADAM29Q9UKF5 820 aa25.97■■□□□ 1.75
SMARCD3-201ENST00000262188 SATB2Q9UPW6 733 aa25.97■■□□□ 1.75
SMARCD3-201ENST00000262188 B3GALT1Q9Y5Z6 326 aa25.97■■□□□ 1.75
SMARCD3-201ENST00000262188 A0A1W2PR48 441 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 PSMD12O00232 456 aaPredicted RBP25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 B3GALT2O43825 422 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 SERPINB7O75635 380 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 SCELO95171 688 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 FGF5P12034 268 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 ETS2P15036 469 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 PIK3R1P27986 724 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 ZFP36L2P47974 494 aaKnown RBP25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 C2orf80Q0P641 193 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 KRT72Q14CN4 511 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 PRSS53Q2L4Q9 553 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 GARNL3Q5VVW2 1013 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 BORAQ6PGQ7 559 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 ZCCHC7Q8N3Z6 543 aaKnown RBP25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 DPY30Q9C005 99 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 AKAP7Q9P0M2 348 aaPredicted RBP25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 SEC16AO15027 2179 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 FAM227AF5H4B4 570 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 KRT36O76013 467 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 LIM2P55344 173 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 FAM53BQ14153 422 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 FAM214AQ32MH5 1076 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 CA13Q8N1Q1 262 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 FAM47BQ8NA70 645 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 FBXO8Q9NRD0 319 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 ENAMQ9NRM1 1142 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 KCMF1Q9P0J7 381 aa25.96■■□□□ 1.75
SMARCD3-201ENST00000262188 TEX51A0A1B0GUA7 166 aa25.95■■□□□ 1.75
SMARCD3-201ENST00000262188 JMJD7P0C870 316 aa25.95■■□□□ 1.75
SMARCD3-201ENST00000262188 ALDH9A1P49189 494 aa25.95■■□□□ 1.75
SMARCD3-201ENST00000262188 IL11RAQ14626 422 aa25.95■■□□□ 1.75
SMARCD3-201ENST00000262188 TMEM132CQ8N3T6 1108 aa25.95■■□□□ 1.75
SMARCD3-201ENST00000262188 OR7A2PQ8NGA2 310 aa25.95■■□□□ 1.75
SMARCD3-201ENST00000262188 CLIP3Q96DZ5 547 aa25.95■■□□□ 1.75
SMARCD3-201ENST00000262188 AKIRIN1Q9H9L7 192 aaPredicted RBP25.95■■□□□ 1.75
SMARCD3-201ENST00000262188 LOC100653049A0A140TA62 436 aa25.95■■□□□ 1.74
SMARCD3-201ENST00000262188 PLD2O14939 933 aa25.95■■□□□ 1.74
SMARCD3-201ENST00000262188 SLC22A3O75751 556 aa25.95■■□□□ 1.74
SMARCD3-201ENST00000262188 KRT34O76011 436 aa25.95■■□□□ 1.74
SMARCD3-201ENST00000262188 ACPPP15309 386 aa25.95■■□□□ 1.74
SMARCD3-201ENST00000262188 RPL5P46777 297 aaKnown RBP25.95■■□□□ 1.74
SMARCD3-201ENST00000262188 DGKQP52824 942 aa25.95■■□□□ 1.74
SMARCD3-201ENST00000262188 CLDN8P56748 225 aa25.95■■□□□ 1.74
SMARCD3-201ENST00000262188 SHC2P98077 582 aa25.95■■□□□ 1.74
SMARCD3-201ENST00000262188 ERV3-1Q14264 604 aa25.95■■□□□ 1.74
SMARCD3-201ENST00000262188 FAM71E1Q6IPT2 247 aa25.95■■□□□ 1.74
SMARCD3-201ENST00000262188 PATL1Q86TB9 770 aaKnown RBP25.95■■□□□ 1.74
SMARCD3-201ENST00000262188 MYNNQ9NPC7 610 aa25.95■■□□□ 1.74
SMARCD3-201ENST00000262188 ARL8BQ9NVJ2 186 aa25.95■■□□□ 1.74
SMARCD3-201ENST00000262188 DAPP1Q9UN19 280 aa25.95■■□□□ 1.74
SMARCD3-201ENST00000262188 FAM32AQ9Y421 112 aaKnown RBP25.95■■□□□ 1.74
SMARCD3-201ENST00000262188 CCDC187A0A096LP49 1063 aa25.94■■□□□ 1.74
SMARCD3-201ENST00000262188 CHST10O43529 356 aa25.94■■□□□ 1.74
SMARCD3-201ENST00000262188 NSA2O95478 260 aaKnown RBP25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms